Gene GM21_3791 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_3791 
Symbol 
ID8139165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp4366149 
End bp4366637 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content56% 
IMG OID644871410 
ProductColicin V production protein 
Protein accessionYP_003023568 
Protein GI253702379 
COG category[R] General function prediction only 
COG ID[COG1286] Uncharacterized membrane protein, required for colicin V production 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones126 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCTTC TCGACATCCT TATCTGGGTG ATATTGCTCT TCTTTGTGGC AAAAGGGTTC 
TCGAAGGGGC TGGTGCGGGA GGCTTGCTCC CTGCTCGGCC TTGTCACGGG CGGCTGGGCC
GCTTTCAGAT ATTATTCATT TCTAAGCCTC GGGATCAGGC AGTTCATAAA TCTTCCCCCG
CAGGTGGCGC AGCCGCTATC GTTTCTCCTT ATCTTCCTGT TGCTAGGCGT CCTTTTCTAT
TTCCTTGGTC ATCTGCTCAC CGTCATCTTC AAGGTCATGC TCCTGGGAGG GATCAACCGG
ATCGGCGGCA TCGTGTTCGG TTTTCTGCAG GGAGGGTTCG TCCTTTGCGT CGTCCTCTAC
CTCGCGACCA CGAAACCCAT GCCCGACAAG TTCAAGGGAT GGGTCTCCCG ATCCAAGACC
GCAAACGCTT TCGCCTCGAC CGGGGGCAGC ATCGCCGCCG GATGGGAAGG GGCAGTACGC
AGGAAATAA
 
Protein sequence
MILLDILIWV ILLFFVAKGF SKGLVREACS LLGLVTGGWA AFRYYSFLSL GIRQFINLPP 
QVAQPLSFLL IFLLLGVLFY FLGHLLTVIF KVMLLGGINR IGGIVFGFLQ GGFVLCVVLY
LATTKPMPDK FKGWVSRSKT ANAFASTGGS IAAGWEGAVR RK