Gene GM21_3400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_3400 
Symbol 
ID8138767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp3930998 
End bp3932347 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content62% 
IMG OID644871017 
ProductDegT/DnrJ/EryC1/StrS aminotransferase 
Protein accessionYP_003023182 
Protein GI253701993 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones133 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCAGAGA CGGAAAGGCG GGAAAAGGAG CTGAGGCAGC AGGCGATAGA TGCGGCGATA 
GAGTACTACA ACTTCAAGCA CAAAGGGAGC AAACCCTTTA CCCCCGGCGA CCGGATTTCG
TACGCCGGTA GGGTATTCGA CGAGAACGAA ATATCCCTTC TGATCGACTC ATCCCTGGAT
TTCTGGCTCA CCACGGGGCG GTACGCGGAG CGTTTCGAGA GCGAATTCGC GCAGTTTCTC
GGCGCACAGC ACTGCTCCCT GACCAATAGC GGTTCGTCGG CGAACCTGCT CGCTTTCATG
GCCCTCACCT CGCCCAAGCT AGGGGAGCGG CGGATAAGGA AAGGCGACGA GGTCATCACC
GTCGCGGCGG GATTCCCCAC CACCGTCGCC CCGATCGTGC AGTACGGCGC CGTTCCGGTA
TTCGTCGACG TTACCTTCCC CACCTACAAC ATCGACTGCT CGCAGCTGGA GAACGCCCTG
TCGGACAGGA CCAAGGCCGT GATGGTGGCC CACACGTTGG GAAACCCCTT CGACCTCGCC
GCCGTCAAAT CGTTCTGCGA CCGCCACAAC CTCTGGCTCG TCGAGGATAA CTGCGACGCG
CTAGGGTCGC GCTACCTCTA CAAGGGGGAG TGGCGCTACA CCGGCACCAT CGGCGACCTC
GGCACCTCGA GCTTTTACCC GCCGCACCAC ATGACCATGG GGGAGGGGGG CGCCGTCTAC
ACCGACGGGA CCATGCTGAA GCGCCTGGTG GAATCCTTCC GTGACTGGGG GCGCGACTGC
TGGTGCCCCT CCGGCCGCGA CAACACCTGC GGCAACCGCT TCGGCCAGCA GTTCGGCGAG
CTCCCCTACG GCTACGACCA CAAGTACGTC TACTCGCATT TCGGCTACAA CCTGAAGGTG
ACCGACATGC AGGCGGCCAT CGGCTGCGCG CAGCTGCAGA AGCTTCCCCG TTTCATCGAG
GCGCGCAAGA GGAATTGGAA TCTTTTGCGC GACGGGCTCG CCGGGTTGGA GGAGCGGCTG
ATCCTGCCGG AGGCGACCGA GAACTCCGAC CCCTCCTGGT TCGGATTCCT CATCACCGTC
AGGGAAGGGG CGGGGCTCAC CAGGGAGAAG ATGGTGGCGC ACCTTGAAGG GAAGGGGATA
CAGACCCGGA TGCTCTTCGC CGGTAATCTC ATCAAGCACC CCTGCTTCGA CGAAATGAGA
AAAGACGCGA CGGGGTACAG GATCGCCGGC AACCTCGACA ACACCGACCG CATCACGCGC
GACACCTTCT GGGTCGGGGT CTACCCCGGC ATGACCGACG ACATGGTCGG GTACATGGTC
TCCACCATCA CGGAGTGCGC CAAGCGATGA
 
Protein sequence
MAETERREKE LRQQAIDAAI EYYNFKHKGS KPFTPGDRIS YAGRVFDENE ISLLIDSSLD 
FWLTTGRYAE RFESEFAQFL GAQHCSLTNS GSSANLLAFM ALTSPKLGER RIRKGDEVIT
VAAGFPTTVA PIVQYGAVPV FVDVTFPTYN IDCSQLENAL SDRTKAVMVA HTLGNPFDLA
AVKSFCDRHN LWLVEDNCDA LGSRYLYKGE WRYTGTIGDL GTSSFYPPHH MTMGEGGAVY
TDGTMLKRLV ESFRDWGRDC WCPSGRDNTC GNRFGQQFGE LPYGYDHKYV YSHFGYNLKV
TDMQAAIGCA QLQKLPRFIE ARKRNWNLLR DGLAGLEERL ILPEATENSD PSWFGFLITV
REGAGLTREK MVAHLEGKGI QTRMLFAGNL IKHPCFDEMR KDATGYRIAG NLDNTDRITR
DTFWVGVYPG MTDDMVGYMV STITECAKR