Gene GM21_3352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_3352 
Symbol 
ID8138719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand- 
Start bp3878910 
End bp3880007 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content64% 
IMG OID644870970 
Productaspartate-semialdehyde dehydrogenase 
Protein accessionYP_003023135 
Protein GI253701946 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0136] Aspartate-semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01745] aspartate-semialdehyde dehydrogenase, gamma-proteobacterial 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value0.0858212 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTCG GACTGGTCGG TTGGCGTGGC ATGGTAGGCT CCGTTTTGCT CCAGCGCATG 
CAGGAGGAAA ACGATTTCCA GGGAATAGAG CCGGTTTTCT TCACAACCTC GCAGGTGGGG 
CAGCCCGCCC CGATGAACGC CGGGACCCTG AAGGACGCCT CGGATATCAA CGAGCTTAAG 
AAGCTGGACG TGATCATCAC CTGCCAGGGT GGCGACTACA CCAAGGCGGT GCGCCCGGAG 
CTGAACAAGG CGGGATGGAA GGGGTACTGG ATCGATGCTG CCAGCACGCT CCGCATGGAG 
AACGACGCCG TCATCATCCT CGACCCGATC AACCGCAACG TCATCGACGC TGCCCTTGCC 
AAAGGGGTCA AGGACTACAT CGGCGGCAAC TGCACCGTGA GCCTCATGCT CATGGGCCTG 
GGCGGGCTCT TCAAGGCGGG TGCCGTCGAG TGGATCAGCT CCATGACCTA CCAGGCGGCC 
TCCGGCGCGG GCGCTCCCAA CATGCGCGAG CTCCTCTCCC AGATGGGCGT ATTGCAGGGC 
TCGGTAGCGG ATCTCCTGGC GACCCCGGGC TCCGCCATCC TGGAGATCGA CCGCAAGGTG 
ACCCAGACCC TGAGGGGAGG GGATCTCCCG ACCAAGGAGT TCGGTTTCCC GCTGGCGGGG 
AGCGTCCTTC CCTGGATCGA CCGCGAGGTC GAGGACGGGC AGAGCCGCGA GGAGTGGAAA 
GGGTACGCCG AGACCAACAA GATCCTCGGC ACCGCGAACC CGATCCCGGT CGACGGCATC 
TGCGTCCGCG TGGGCGCCAT GCGCTGCCAC AGCCAGGCGC TGACCATCAA GCTGAACAAG 
GACATCCCCA TCGGCGAGAT CGAGCAGATG ATCAAGAACG ACAACCAGTG GGTCAAGTTC 
GTCCCCAACA CCAAGGCGGA GACCCTGGCT CAGTGCACCC CGGCAGCCGT TTCCGGTTCG 
CTCACCGTGC CGGTAGGCCG CGTGAGGAAG ATGAAGATGG GGCCGCAGTA TCTCTCCGCC 
TTCACCTGCG GCGATCAGCT CCTTTGGGGC GCCGCAGAGC CGCTGCGCCG CATGCTTCAG 
ATACTCAAGG AGCGGTAA
 
Protein sequence
MKVGLVGWRG MVGSVLLQRM QEENDFQGIE PVFFTTSQVG QPAPMNAGTL KDASDINELK 
KLDVIITCQG GDYTKAVRPE LNKAGWKGYW IDAASTLRME NDAVIILDPI NRNVIDAALA 
KGVKDYIGGN CTVSLMLMGL GGLFKAGAVE WISSMTYQAA SGAGAPNMRE LLSQMGVLQG 
SVADLLATPG SAILEIDRKV TQTLRGGDLP TKEFGFPLAG SVLPWIDREV EDGQSREEWK 
GYAETNKILG TANPIPVDGI CVRVGAMRCH SQALTIKLNK DIPIGEIEQM IKNDNQWVKF 
VPNTKAETLA QCTPAAVSGS LTVPVGRVRK MKMGPQYLSA FTCGDQLLWG AAEPLRRMLQ 
ILKER