| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_3275 |
|---|
| Symbol | |
|---|
| ID | 8138632 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | - |
|---|
| Start bp | 3805513 |
|---|
| End bp | 3806292 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644870884 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_003023059 |
|---|
| Protein GI | 253701870 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 112 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACCG CTAACCAACC GCTTCTAAGC CTCAAGGGGA TCACCAAGCG CTTCGGCGCC
CTGACCGCGG TAAACGGCGT CGACCTCGAT GTCTGCCCGG GGGAAATCGT GGTCATCATA
GGGCCATCCG GGTCGGGAAA GTCGACGCTG TTGCGCTCGG TGAACTTCCT GGAGGAGATA
GAGGAAGGGA CCATAACCTT CGAAGGGAGC GAGATCGGCT ACGTGAAGAG CAAGCACGGC
CGGCGCCATC TGGACGCTCC CGCTAAGATC TGCGAGCTTC GCACCGAGAT CGGCATGGTA
TTCCAGCACT TCAACCTCTT CCCGCACATG ACCGTGCTCG GCAACGTGAT GGAGGGTCCG
CTCACCGTGC AGAAGAAGTC TCCCGAAGCT GCACGCGAGA TTGCGCTGGA CATGCTGGCG
AAGGTGGGGC TTTCCGACAA GCGCGACGTC TACCCGGCGA CCCTGTCGGG GGGGCAGAAG
CAGCGCGTCG CCATAGCGCG GGCGCTGGCC ATGCGGCCGA AGCTGATGCT TTTCGACGAG
CCGACTTCCG CCCTCGATCC CGAGCTTATC GGCGAGGTGT TCGACACTAT CCGGTCTCTG
GGCAAGGAGG GGATGACCAT GATCATCGTC ACCCATCAGA TGGGGTTTGC CAAGGAGATG
GCGGACCGGG TCATCTTCAT GGAGAAGGGA TCCTTCGTCG CCCAGGGAAC CCCCGAAGAC
TTCTTCAGCA ACCAGATGGA GCACGAAAGA ATTCAGTCCT TTCTCAACCG CATCATGTGA
|
|---|
| Protein sequence | MKTANQPLLS LKGITKRFGA LTAVNGVDLD VCPGEIVVII GPSGSGKSTL LRSVNFLEEI
EEGTITFEGS EIGYVKSKHG RRHLDAPAKI CELRTEIGMV FQHFNLFPHM TVLGNVMEGP
LTVQKKSPEA AREIALDMLA KVGLSDKRDV YPATLSGGQK QRVAIARALA MRPKLMLFDE
PTSALDPELI GEVFDTIRSL GKEGMTMIIV THQMGFAKEM ADRVIFMEKG SFVAQGTPED
FFSNQMEHER IQSFLNRIM
|
|---|
| |