Gene GM21_3080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_3080 
Symbol 
ID8138430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand- 
Start bp3572477 
End bp3572950 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content55% 
IMG OID644870684 
Productbeta-Ig-H3/fasciclin 
Protein accessionYP_003022866 
Protein GI253701677 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2335] Secreted and surface protein containing fasciclin-like repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.0000418721 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGAGGCG TTGGATGCAA TAAATGTCAG ACGCTTGAAA GGGAGGCCGC TGTGAAAACG 
ATACTTGAAA CCCTTGCTGA AACTGGTTCC TTTCAGAGCC TGCTGGCGGC GCTGGAGCAG 
GCGAACCTGA CCGAAAAGCT GGCAGGACCC GGACCGTTCA CGCTATTTGC GCCGGATGAC 
CGGGCTTTCG AGCGGGTCAA CTTACAGGAA ATAGGCAAAG ACGTGGACAC CCTCTCCTCG 
GTGTTGACCT ATCACATCCT GACCGGCAGG TCGAGCTTTG CCGAGATCGG CGCGAAAGAG 
TCCTTGTACA CACAATGCAA CAAGTCGTTG ACGGTGCATC TGGAAGAAGG CAAGCCGGTG 
ATAGACAACG GCAACGTGGT GAAGGCCGAC ATCGAGTGCA CCAACGGCAT CATCCATGTC 
ATCGATAACG TATTCCTGCC GCAGTTTTCC GGATGGTACT GCGGTTGCTG CTGA
 
Protein sequence
MRGVGCNKCQ TLEREAAVKT ILETLAETGS FQSLLAALEQ ANLTEKLAGP GPFTLFAPDD 
RAFERVNLQE IGKDVDTLSS VLTYHILTGR SSFAEIGAKE SLYTQCNKSL TVHLEEGKPV 
IDNGNVVKAD IECTNGIIHV IDNVFLPQFS GWYCGCC