Gene GM21_3043 details

Gene Information

• Locus tag: GM21_3043
• ID: 8138389
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sp. M21
• Kingdom: Bacteria
• Replicon accession: NC_012918
• Strand: +
• Start bp: 3532375
• End bp: 3532866
• Gene Length: 492 bp
• Protein Length: 163 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 644870644
• Product: cytochrome c class I
• Protein accession: YP_003022830
• Protein GI: 253701641
• COG category: [C] Energy production and conversion
• COG ID: [COG2010] Cytochrome c, mono- and diheme variants
• TIGRFAM ID: [TIGR00782] cytochrome c oxidase, cbb3-type, subunit III

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 162
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTCCGACG AAAATAAGGA GTACGACGGC ATCAGGTACC GCCCGGAGAA GAAAACCCCA 
CTGGTCTTCA GGATCCTGTT CTTCGGGCTC ATCCTCTGGG CAATCCCCTT CATGGGGTAC 
TACCTGTTCA GCGGCTGGAG TTCCTACGCC GAGTTCGACG AGATCAAGAA GGCCAAGGAG 
GCCCGGCTGG CGGTCCAGAA AGAGAAAGCC GAGGAGGCCG CTCCCCGCAG CACCAACGAA 
GAGATCAGAA GCACCGACCT CATCGCCCAG GGGAAAGAGG AGTACGCCGA GCGCTGCGCC 
GCCTGCCACG GAGCGGACGG CAAAGGGGGC ATCGGCCCGG ACCTCACCAG CAAAAACTAC 
AAGTACGGCA GGAGCGCCCC GGACGTCACC AGCAGCATCG TAGACGGCCG CCCCGGCGGG 
ATGCCCGGCT TCAAGAACGA CCTCTCCGGT GAGAAGGTGC AGGGACTCGT GCAGTTCGTG 
CTGTCGCTTT GA 

 

Protein sequence

MSDENKEYDG IRYRPEKKTP LVFRILFFGL ILWAIPFMGY YLFSGWSSYA EFDEIKKAKE 
ARLAVQKEKA EEAAPRSTNE EIRSTDLIAQ GKEEYAERCA ACHGADGKGG IGPDLTSKNY 
KYGRSAPDVT SSIVDGRPGG MPGFKNDLSG EKVQGLVQFV LSL