| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_2953 |
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| Symbol | |
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| ID | 8138296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | - |
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| Start bp | 3433922 |
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| End bp | 3434803 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644870551 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_003022740 |
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| Protein GI | 253701551 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 110 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGATCT CCCCATATCG CGCCACAGTC ACCATGCCCC AGATGGAGCA GCCGTACCCG
TCGGTACTGG ACTTTCTGGT CGGGCGTTTC CCGAAGGTGG GGCGCAACTG CTGGGAGCGG
CGCATAGCCC GGGGAAAGGT CCTGGACGAG GAGGGGAACC CCATCACCAG CGCCAGCAGC
TACGCTCCCC AAAAAAGGAT CTTCTACTAC AGGGAGATCG AGAATGAGAA GGTGATCCCC
TTCGCCGAGG AGATCCTGTT CCAAAACGAC GAACTCCTGG TGGCGTGCAA GCCGCATTTC
CTGCCGGTGA CGCCGGGGGG TGGCTACCTC AGTCAAAGCC TCCTGCACCG GTTGAGGGAA
TCCACCGGTA TCCACGACCT GGTACCGCTG CACAGGATCG ATCGCGAAAC CGCCGGCATC
GTCCTTTTCT CCGTCAACCC GAAAACTCGC GGCCTTTACG GCGGGGTGTT CCGGGATGGG
AGCATCGAAA AGAGCTATGA GGCGATATCG GCGGCTCGGA TCGAACCGGG GCAGGCGGAA
TGGCTGGTGG AAAACAGGCT GGTGCAGGGG GAACCGTGGT TCAGGGTGCG AACGGGGGAT
GGTCCCCCCA ACGCCCGGTC GCTCATCCGT TTGGTGGAGC AACGAGATGG CGCGGCGCGC
TTCCAACTGA CACCGGTGAC GGGTAAGACT CATCAACTGC GGGTCCACAT GAGCGGGCTC
GGGTTGCAGA TCCTGCACGA CCGCCTTTAC CCGCAACTGA TGCCCCGACA GCCCGACGAC
TTCGATAGGC CGTTGCAACT TCTGGCAAGG CGCGTGCGGT TTCGGGACCC GCTCTCGGGG
AAGCTCTTGG AGTTCGAATC GGCGCGCAGG CTTTTGTGGT AA
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| Protein sequence | MGISPYRATV TMPQMEQPYP SVLDFLVGRF PKVGRNCWER RIARGKVLDE EGNPITSASS
YAPQKRIFYY REIENEKVIP FAEEILFQND ELLVACKPHF LPVTPGGGYL SQSLLHRLRE
STGIHDLVPL HRIDRETAGI VLFSVNPKTR GLYGGVFRDG SIEKSYEAIS AARIEPGQAE
WLVENRLVQG EPWFRVRTGD GPPNARSLIR LVEQRDGAAR FQLTPVTGKT HQLRVHMSGL
GLQILHDRLY PQLMPRQPDD FDRPLQLLAR RVRFRDPLSG KLLEFESARR LLW
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