Gene GM21_2617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_2617 
Symbol 
ID8137959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp3054551 
End bp3055048 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content61% 
IMG OID644870223 
ProductCheD, stimulates methylation of MCP protein 
Protein accessionYP_003022413 
Protein GI253701224 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG1871] Chemotaxis protein; stimulates methylation of MCP proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones103 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCAGC ACGTACAGAG CCTCGTTTTC CTGAAGCCGG GGCAGATGAT GGTAAGCCCT 
GTACCGACTT TGGTCACCAC GCTGCTCGGG TCCTGCATCG CGGTGACACT TTTTTGCCCC
AGGACCCGCT TCGGCGCCAT CTGCCACGCG CAACTCCCCA GTATTGGCAA TCCGGCCGGC
TGCAGCCATG ATGATCTCTC CCACGCGAGG TACGTGGAGT GTGCCGTCAT GATGATGCTG
GAGCGGCTGC AGGCACACGG CGTCGCCAAC AAGGAACTGC AGGCCAAGGT GTTCGGGGGC
GCCGACATGT TCGAGGGGAA CGTGAAGCGT CCGGGTGTGG GGAAACAGAA CGCGGAGATG
GCGCTCAAGG TGCTGGATCG GGAGGCGGTC AGGGTGCTGT GCCGGGACCT GGGGGGAGAG
CGGGGAAGAA AGATCGTCTT TCATACTGAT ACCGGAGAGG TGCTGTTAAA ACGGCTCGGG
AAATCGGGGG TTTCATAG
 
Protein sequence
MIQHVQSLVF LKPGQMMVSP VPTLVTTLLG SCIAVTLFCP RTRFGAICHA QLPSIGNPAG 
CSHDDLSHAR YVECAVMMML ERLQAHGVAN KELQAKVFGG ADMFEGNVKR PGVGKQNAEM
ALKVLDREAV RVLCRDLGGE RGRKIVFHTD TGEVLLKRLG KSGVS