| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_2310 |
|---|
| Symbol | |
|---|
| ID | 8137650 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | - |
|---|
| Start bp | 2689395 |
|---|
| End bp | 2690519 |
|---|
| Gene Length | 1125 bp |
|---|
| Protein Length | 374 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644869924 |
|---|
| Product | carbamoyl phosphate synthase small subunit |
|---|
| Protein accession | YP_003022116 |
|---|
| Protein GI | 253700927 |
|---|
| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
|---|
| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 95 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCAG TACTTGCTCT GGCGGACGGC CGGATTTTCA AGGGTAAGGC CTTCGGCGCG
ACGGGCGAAA CAAGCGGCGA GGTGGTGTTC AACACCGCCA TGTCCGGCTA CCAGGAAGTC
CTCACCGACC CATCCTACAA GGGGCAGATG GTCACCATGA CCTACACCCA GATCGGCAAC
ACCGGCATCA ACCCGGAAGA CGTGGAAAGC GGCCGGCTCT ACCTTTCCGG CTTCATCGTC
AGGGAATACC TGGACTGCTA TTCCAACTAC CGCGCCACCA TGAGCCTGGA CGCTTATCTC
AAGGAGAACG GGATCGTCGG GATCCAGGGG ATCGACACCC GCGCCCTGAC CCGACACCTG
CGCGACAAGG GAGCCCAAAA CGGCATCATC TCCACCATCG ACTTCGATCC GGAGAGCCTG
GCGAGGAAGG CGCGCGCCAT CCCCTCCATG AGCGGTCTGG ACCTTGCCAC CGGCGTCACC
TGCAGCGCCC CCTACCACTG GACCGAAGGT CTGTGGGACC TGCAGACCGG TTACCCGCAG
GTCGACCGCA AGGATTTGAA GTACAAGGTC GTGGCCTACG ACTTCGGGAT CAAGCTGAAC
ATCCTGCGCT GCCTGGTTTC CGCCGGCTGC GACGTCACCG TGGTGCCGGC GACCTTCCCT
GCCGAGTCCG CGCTCGCCAT GAACCCCGAC GGCATCTTCC TTTCCAACGG CCCGGGCGAC
CCGGAGCCGA TGAAGGAAGT CATCGAGAAC ATCAAGAAAT TCGTCGGCAA GAAGCCTATC
TTCGGCATCT GCCTGGGTCA CCAGCTCATG GGCCTTGCCC TGGGCGGCCG CACCGTGAAG
CTCAAGTTCG GCAACCACGG CTCCAACCTT CCGGTCATGG ACATGGCCAC GAGGAAGGTC
GAGATCACCG CGCAGAACCA CGGCTTCTCC GTCGACATCC TGTCGCTCAG CAACGTGGCC
GGCCTCGCGC ACGAGAACCT GAACGACCAG ACCGTCGAAG GGATGGCGCA CAAGAGCCTC
CCGATCTTCT CGGTGCAGCA TCACCCCGAG GCGTCTCCCG GGCCGCACGA CTCGCACTAC
CTGTTCGACA GGTTTGTGGA GATGATGGAG AAGCATAAGG CGTAG
|
|---|
| Protein sequence | MKAVLALADG RIFKGKAFGA TGETSGEVVF NTAMSGYQEV LTDPSYKGQM VTMTYTQIGN
TGINPEDVES GRLYLSGFIV REYLDCYSNY RATMSLDAYL KENGIVGIQG IDTRALTRHL
RDKGAQNGII STIDFDPESL ARKARAIPSM SGLDLATGVT CSAPYHWTEG LWDLQTGYPQ
VDRKDLKYKV VAYDFGIKLN ILRCLVSAGC DVTVVPATFP AESALAMNPD GIFLSNGPGD
PEPMKEVIEN IKKFVGKKPI FGICLGHQLM GLALGGRTVK LKFGNHGSNL PVMDMATRKV
EITAQNHGFS VDILSLSNVA GLAHENLNDQ TVEGMAHKSL PIFSVQHHPE ASPGPHDSHY
LFDRFVEMME KHKA
|
|---|
| |