Gene GM21_2232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_2232 
Symbol 
ID8137571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp2603967 
End bp2605496 
Gene Length1530 bp 
Protein Length509 aa 
Translation table11 
GC content65% 
IMG OID644869847 
Producttwo component, sigma54 specific, transcriptional regulator, Fis family 
Protein accessionYP_003022039 
Protein GI253700850 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value0.0243568 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGACT CACCGACAAG AATACTTATC ATCGACGACG AGAGGGATGT CTGCACCTTT 
TTCAGCCGGC TTTTGTCGCG CAAGGGGTAC CAGGTGGTCA CCGCCGCCAG CGAGCCCGAG
GCCCTCGCCG CCTTGGAGGC CGCGCAGTTC AGCGTGGCGC TCGTGGACCT GAAGCTCCCC
GACACCGACG GGATCACGCT CTTGGAGATC ATCAAATCGC GGCAGCCCGC CTGCGAGGTC
ATCATCATGA CCGGGTACTC CACCGTCAAG ACGGCGGTCG CCGCCATGCA GCTAGGCGCC
TACGAGTACC TGGAAAAGCC CTTCGACGAC ATCGACCAGA TCGAGCAGCT GGTGGGCAGG
GCCGCAGGTT CCGGCGCGAG CCTTTTGAGG GGGGACAACT CCCATGACGA GTGGGCCGAA
GTGGCCCAGG GTGTAGGTTT CCGGGTCGGA AGCTCCCCGT CCATGAAGAG GATGGTCTCG
CTCGCCTACA AGGTCGCCGG CAAGGACATC AGCGTCCTGA TTCAGGGGAA GACCGGTACC
GGGAAAGAGG TGCTGGCCCG ATTCATCCAC GCCGCCTCCT GCCGCGCCGG GCAGCCCTTC
ATCCCGGTCA ACTGCGGCGC GCTCCCCGAG AATCTCTTGG AGAGCGAGCT CTTCGGGCAC
GAAAAGGGTG CCTTCACCGG CGCCAACCAG ACCCGCCGCG GCATCTTCGA GCTCGCCAAC
AACGGGACGC TCCTCTTGGA CGAGATCGGG GACGCGACGC CGCAGATCCA GGTCAAGCTC
TTGCGCGTCC TGGAAACCGG CGAGTTCATG AGGGTAGGGG GGGAGCGCCC GATCAAGACC
GACGTCAGGG TGATAGCCGC GACCAACGTG GACCTGGAGC AGGCCATCGC CGAGAAGAGC
TTCCGCGAGG ACCTCTTCTA CCGCCTCAAC GTGGTGCGGC TGGAGATCCC GTCTCTTAGC
TCACGGTCCG AGGACATACC GCTTCTGGCC GAGCATTTCG TGCACCAGTT GAACCGCGAC
CTGAAGCTCG CCGCCGGAAC TGTTCGCATG CTGCAGGGGT ACGCCTGGCC CGGGAACATC
CGCGAGCTGG CCAACGTGAT GAGGCGGGCC GTGGTCATCT GCAACGGCGA CACCATCCTT
CCCGAGCACC TGGGGGGGAC CTTTCTCGCC GGACCCACGG CGCCTGAGCG GGGAAGCGCG
GCGAAGACAA TCCAGCAACC GGACCGCGGC AGGCTGCAGT CCACCCTCCT GGAGCATTGC
GGCAGCGCGG AGGAGCTGGA GCGGCTGGAT GCCGACGAGC TGAACCGGCT TCTGGATTCG
CTGCGCCAGG CGCAGTCGAA CCTCCTCGGC GTGATGCGCA AAAAGAAGAT CGTTCCGGCC
CTGCACGCGC TGAAAGACTC GGAGGCCGAG ACCATCAAGG AAGCGCTGGC GCAGTACGAC
GGCAACATCA CCGAAGCCGC GAGGGCGCTC GGCATCGCCC GCAACACCCT CTACAGAAAG
ATAAAGGAGC TGGGGCTGCC GGGAAGGTAG
 
Protein sequence
MTDSPTRILI IDDERDVCTF FSRLLSRKGY QVVTAASEPE ALAALEAAQF SVALVDLKLP 
DTDGITLLEI IKSRQPACEV IIMTGYSTVK TAVAAMQLGA YEYLEKPFDD IDQIEQLVGR
AAGSGASLLR GDNSHDEWAE VAQGVGFRVG SSPSMKRMVS LAYKVAGKDI SVLIQGKTGT
GKEVLARFIH AASCRAGQPF IPVNCGALPE NLLESELFGH EKGAFTGANQ TRRGIFELAN
NGTLLLDEIG DATPQIQVKL LRVLETGEFM RVGGERPIKT DVRVIAATNV DLEQAIAEKS
FREDLFYRLN VVRLEIPSLS SRSEDIPLLA EHFVHQLNRD LKLAAGTVRM LQGYAWPGNI
RELANVMRRA VVICNGDTIL PEHLGGTFLA GPTAPERGSA AKTIQQPDRG RLQSTLLEHC
GSAEELERLD ADELNRLLDS LRQAQSNLLG VMRKKKIVPA LHALKDSEAE TIKEALAQYD
GNITEAARAL GIARNTLYRK IKELGLPGR