Gene GM21_1958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_1958 
Symbol 
ID8137292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp2271192 
End bp2272598 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content62% 
IMG OID644869572 
Productformate dehydrogenase family accessory protein FdhD 
Protein accessionYP_003021769 
Protein GI253700580 
COG category[C] Energy production and conversion 
COG ID[COG1526] Uncharacterized protein required for formate dehydrogenase activity 
TIGRFAM ID[TIGR00129] formate dehydrogenase family accessory protein FdhD 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones134 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTAGCA AGATCTACAG TTTCAACAAA GGCGTGCTGG AGCAGGAAGA GGGCGGGGTG 
GTCAACGAAT ACCCGCTGCA ACTGGTGGTG AACGGGCGCG AGCTGGCGAC CCTCATCGCT
TCCCCTCATG ATCTCCGCTT CCTGGTGGCC GGCTTTCTGC GCCTGCAGGG GTTCGTCTCG
CAGGTGGAGG ACTTTCAGGC CTTGGCCATC TGTCAGGATT TCGGGGCCGC CAGCGTCACC
ATCCGGGGGG AGCTCCCCGA GCGCCTGAAG CCGGTACTGA CCTCCGGCTG CGGCACCGGC
ATCAGCTTCA ACATGCCCAA GCCCGTGGAG AAAAAGGGGC CTTCCCGGGT CCATTCCACC
GCCTCGATCT TCACGCTGAT GAACCAGTTG GCGCAGAAGG CGGAAGGGTA CAAAAACCAT
GGCGGCATGC ATTCCGCAGG GGTGGGCGAT ACCGAACTCA TCCTGCATGC GGAAGATATC
GGCCGTCACA ACACCATAGA CCGCATAGCC GGAGAAGCCC TTTTGAAGGG GATTTCCCTG
GAAGGAAAGA TTTTGGTCAC CTCGGGGCGC GTTTCGACCG AGCTGGTGGC GAAGGCCTCG
CTTCTCGGCA TCGACGTGAT CGCTTCCCGC ACCTCGCCTA CCGACATGGC GATCAGGATG
GCGGAAGAAG CCGGCATCAC CCTGGTCGGC TACGTCAGGG CCATGAGCTT CAAGCTCTAC
ACCCACGTCG AGGGGATCGA TTTCCGCGCC GGCGACGACA AGGTCCAGGG GGTGACCGGC
GTGATCCTTG CCGGGGGCGC CTCCAGCCGC ATGGGGAGCA ACAAGGCCCT GCTGCCGCAC
AAGGGAGGGC GCTTCATCGA AAGCATCTAC CGGGAGCTTT GCGAGATCTT CCCGGAGGTG
ATCCTGGTGA CCAACACCCC GGAGCAATAC CAGTTTCTTC CATGCCGGAA GGTACCCGAC
CTCTACGAGG GGATGGGTGC CCTGGCGGGT ATCCACGCGG GGCTCTCCCA GAGCTCTAAC
CCTGCCGTAT TCACCGTGGC CTGCGACATG CCGCACCTGA ACCCGGCGCT GATCAGGCAC
ATCGCGAGCC ACCGCCACGG CTGCGACCTG GTGCTCCCGA TGAGCCCGCA AGGCTACGAA
CCGCTGCACG CGCTGTACAA CAAGGGGTGC CTGCCGGCCA TGGAATCTTC GCTCAAAAAC
GGCAAACGCC GCATCGTATC CATCCTGCCG CGGGTGAACG TGCGTGAAAT AAGCCCTTCG
GAGGTGGCGG GTTTCGACCC CCGCTTCGAT TCCTTCAGCA ACATCAACAC GCCGCAGGAA
TACTACGACC TGAGAAACGC CGACAAGGAA AGGGCCGTCG CCGGCGAAGC TTTTTCCGAC
GCGGCTCAGC AAAAGCTGCA GGCCTGA
 
Protein sequence
MASKIYSFNK GVLEQEEGGV VNEYPLQLVV NGRELATLIA SPHDLRFLVA GFLRLQGFVS 
QVEDFQALAI CQDFGAASVT IRGELPERLK PVLTSGCGTG ISFNMPKPVE KKGPSRVHST
ASIFTLMNQL AQKAEGYKNH GGMHSAGVGD TELILHAEDI GRHNTIDRIA GEALLKGISL
EGKILVTSGR VSTELVAKAS LLGIDVIASR TSPTDMAIRM AEEAGITLVG YVRAMSFKLY
THVEGIDFRA GDDKVQGVTG VILAGGASSR MGSNKALLPH KGGRFIESIY RELCEIFPEV
ILVTNTPEQY QFLPCRKVPD LYEGMGALAG IHAGLSQSSN PAVFTVACDM PHLNPALIRH
IASHRHGCDL VLPMSPQGYE PLHALYNKGC LPAMESSLKN GKRRIVSILP RVNVREISPS
EVAGFDPRFD SFSNINTPQE YYDLRNADKE RAVAGEAFSD AAQQKLQA