| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_1793 |
|---|
| Symbol | |
|---|
| ID | 8137124 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | + |
|---|
| Start bp | 2084434 |
|---|
| End bp | 2085609 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644869405 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003021605 |
|---|
| Protein GI | 253700416 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3408] Glycogen debranching enzyme |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
|---|
| Fosmid unclonability p-value | 0.0265229 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCATG AACTGCTGAC GGAGTGCTAC CGCGAGGCGC TGGCGCTTTT GCGGGAGAAC
TCGACGCCGG GCGGCATCCT TGCCTCGGGG AGGAACCAGA GGTCGGAGGG GCGCAACTAT
ACCAGCATCT TCGGCCGCGA CGCCTCCATC TGCGCTTTGG GGATGGCGGT GTCGGGAGAC
GCCGAATTGC GGCGCATAGC GGCGGAGGGC CTTCTGACCC TGGCCCGGTA CCAGGCCGGC
AACGGCCAGA TACCGAAGTA TGTGAAGCCT GAGCTGGGGG AGGCGGACTT CTGGTACTCC
GGCTGCATCG ACGCCACCTT GTGGTGGCTC ATCGCCATTG CCTTCATGGA CCGCGTTCTT
CCCGAAGGGG AACTGGGAGA GCGGCTCGCC CCGCAGACCG GCCTCGCCCT TTCCTGGCTC
CAGTGCCAGG AACACCAGGT CTGGCGCCTG CTCCAGCAAC TGGACGCAAG CGACTGGGCC
GACATCATGC CGCGGGCGGG GTACGTCCTT TACACCAACG TCCTTTGGTA CTGGACCAAG
ACCCTCTACG GCCTCCCCAG CGCGGCGGAG ACCAAAGAGT ACCTGAACAC GCTCCTCTCC
CCCTTCGGCA GGGTGGTTCC CGCGCAAAAG CGCGCCCGCC TGCTGGTCCA TTACGTCCGA
AACCGCTGCA AGCCGTCCCC CTTTTATCTC AGTTTCGTCA ACTTCTCCGA CTGGGGCGAG
GAGATCGACA TCTTCGGCAA CATCATGGCG CACCTGGTCG GGGTGAGTCC CCCCTCCACC
GGCGACAAGG CCGTTCAGGC ACTTTTGGCC CTGAAGGCGA ACGACCCCCA CCCCATCAGG
GTGGTGGGAG ACCCGATCCG GCCCGGTTCC AGGCTTTGGC GCCCCTACAT GCAACGCCAC
CGGCAGAACC TCGCCTGGCA GTACCATAAC GGCGGCGCCT GGCCCTTCGT CGGGGGATTC
TGGGTGCTGC TACTGGCTCG CCTGGGGCGG ACCGCGCAGG CGTGGTCGGA GTTGGAGAAG
CTGGCCCGGT CCAACCGGGT GAACGGTTGG GAGTTCAACG AATGGTTCCA GGGGGTGACA
GGCGAGCCTA TGGGGATGCC CCGGCAGTCC TGGAACGCGG CTCTCTACGT CCTCGCCTAC
CGCGCCTTAG CCGACGGCAC GCGCTACCTT CCCTGA
|
|---|
| Protein sequence | MDHELLTECY REALALLREN STPGGILASG RNQRSEGRNY TSIFGRDASI CALGMAVSGD
AELRRIAAEG LLTLARYQAG NGQIPKYVKP ELGEADFWYS GCIDATLWWL IAIAFMDRVL
PEGELGERLA PQTGLALSWL QCQEHQVWRL LQQLDASDWA DIMPRAGYVL YTNVLWYWTK
TLYGLPSAAE TKEYLNTLLS PFGRVVPAQK RARLLVHYVR NRCKPSPFYL SFVNFSDWGE
EIDIFGNIMA HLVGVSPPST GDKAVQALLA LKANDPHPIR VVGDPIRPGS RLWRPYMQRH
RQNLAWQYHN GGAWPFVGGF WVLLLARLGR TAQAWSELEK LARSNRVNGW EFNEWFQGVT
GEPMGMPRQS WNAALYVLAY RALADGTRYL P
|
|---|
| |