Gene GM21_1793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_1793 
Symbol 
ID8137124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp2084434 
End bp2085609 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content65% 
IMG OID644869405 
Producthypothetical protein 
Protein accessionYP_003021605 
Protein GI253700416 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3408] Glycogen debranching enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value0.0265229 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCATG AACTGCTGAC GGAGTGCTAC CGCGAGGCGC TGGCGCTTTT GCGGGAGAAC 
TCGACGCCGG GCGGCATCCT TGCCTCGGGG AGGAACCAGA GGTCGGAGGG GCGCAACTAT
ACCAGCATCT TCGGCCGCGA CGCCTCCATC TGCGCTTTGG GGATGGCGGT GTCGGGAGAC
GCCGAATTGC GGCGCATAGC GGCGGAGGGC CTTCTGACCC TGGCCCGGTA CCAGGCCGGC
AACGGCCAGA TACCGAAGTA TGTGAAGCCT GAGCTGGGGG AGGCGGACTT CTGGTACTCC
GGCTGCATCG ACGCCACCTT GTGGTGGCTC ATCGCCATTG CCTTCATGGA CCGCGTTCTT
CCCGAAGGGG AACTGGGAGA GCGGCTCGCC CCGCAGACCG GCCTCGCCCT TTCCTGGCTC
CAGTGCCAGG AACACCAGGT CTGGCGCCTG CTCCAGCAAC TGGACGCAAG CGACTGGGCC
GACATCATGC CGCGGGCGGG GTACGTCCTT TACACCAACG TCCTTTGGTA CTGGACCAAG
ACCCTCTACG GCCTCCCCAG CGCGGCGGAG ACCAAAGAGT ACCTGAACAC GCTCCTCTCC
CCCTTCGGCA GGGTGGTTCC CGCGCAAAAG CGCGCCCGCC TGCTGGTCCA TTACGTCCGA
AACCGCTGCA AGCCGTCCCC CTTTTATCTC AGTTTCGTCA ACTTCTCCGA CTGGGGCGAG
GAGATCGACA TCTTCGGCAA CATCATGGCG CACCTGGTCG GGGTGAGTCC CCCCTCCACC
GGCGACAAGG CCGTTCAGGC ACTTTTGGCC CTGAAGGCGA ACGACCCCCA CCCCATCAGG
GTGGTGGGAG ACCCGATCCG GCCCGGTTCC AGGCTTTGGC GCCCCTACAT GCAACGCCAC
CGGCAGAACC TCGCCTGGCA GTACCATAAC GGCGGCGCCT GGCCCTTCGT CGGGGGATTC
TGGGTGCTGC TACTGGCTCG CCTGGGGCGG ACCGCGCAGG CGTGGTCGGA GTTGGAGAAG
CTGGCCCGGT CCAACCGGGT GAACGGTTGG GAGTTCAACG AATGGTTCCA GGGGGTGACA
GGCGAGCCTA TGGGGATGCC CCGGCAGTCC TGGAACGCGG CTCTCTACGT CCTCGCCTAC
CGCGCCTTAG CCGACGGCAC GCGCTACCTT CCCTGA
 
Protein sequence
MDHELLTECY REALALLREN STPGGILASG RNQRSEGRNY TSIFGRDASI CALGMAVSGD 
AELRRIAAEG LLTLARYQAG NGQIPKYVKP ELGEADFWYS GCIDATLWWL IAIAFMDRVL
PEGELGERLA PQTGLALSWL QCQEHQVWRL LQQLDASDWA DIMPRAGYVL YTNVLWYWTK
TLYGLPSAAE TKEYLNTLLS PFGRVVPAQK RARLLVHYVR NRCKPSPFYL SFVNFSDWGE
EIDIFGNIMA HLVGVSPPST GDKAVQALLA LKANDPHPIR VVGDPIRPGS RLWRPYMQRH
RQNLAWQYHN GGAWPFVGGF WVLLLARLGR TAQAWSELEK LARSNRVNGW EFNEWFQGVT
GEPMGMPRQS WNAALYVLAY RALADGTRYL P