Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_1762 |
Symbol | |
ID | 8137093 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | + |
Start bp | 2051788 |
End bp | 2053176 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644869374 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_003021574 |
Protein GI | 253700385 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 0.00610316 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGGAGTTGA AGTCTAGCCT TTTCTGTTGG GCCAGGCTCT CTGAGCCCGG CGCGAAATCC TTCCTGCTCC AGGCGCTGCT GGGGGGAGTG CTCACCTTCC TCTTCTGGCT GCTCCAGGCG GCCATCGACT ATTTTCTTTT CGACGGGAAC TCCTTCTACA GATACCTGCT GCATCCGGAC CGGCACCAGG CTGCCGAGTT TTCCCTGGTG GTCTTCCTGG TCTGCTGCCT GCTCCTTTAC AGCAGGCACT CCCACCAGTT GCAGGCGAAA CTGCAAGCGG CCCTGAAGGC GGCGCTCGAC AAGTCAGAGG ACGACAAGGC AAAACTGCGC GGCATCGTCG AGGCGATGGG AGACGCCATC TCCATCCAGG CGCCGGATAT GACCATCGTC TACCAAAACC GAGCCCATGT GGAGATGATG GGGCAGCATG TCGGAGAGCC TTGCTACCAA GCGTACCGCC AGGAAAAAGA AACCTGCCCC GCCTGCCACC TGGCGGCGGC CTTCGCGGAC GGCAAGGTGC ACCGCTCCAA GGTGAGTCCG GAGCCCGGCA ACGGCGACCG CTACGTCGAG ATAACGGGCT CGGTGCTGAA CGGGGCCGAC GGCAGGCCCT CTCTCGGCAT CGAGGTGGTG CGGGACGTCA CGGCGCAGCG GTTGGTTGAG CGCGAGGCGG CCCAGTTGAA CCTGGCCCTC ACCCGGCAGG CCGGCGAACT GAAGCAGGTG AACCGTGAAC TGGAGGCGTT CTGCCTGGCT GTCGCCCACG ATCTCCGCGC GCCGCTTACC CGGATCTACA GTTCCGCCCA GGAACTGCAG GGGTATGGCG AGCTGCTGGA CGAAAACGGC CGTTTCTTCG TATCGCTCGT GAACGACGGC TGCGTCCAGA TGGAGTCGAT GATCGATGCG CTCATGGTCC TTTGCCATGT GACGGAGATG GAGATGGCAC CCGCTCCTGT GGATCTGGTC GAACTGGCGC AGGAACTGGT GGCGCAACTG CAACTCGACA CCCCGGGGCG CGAGGTGACC GTTCGCCTTC CCGAGCGGCT CGTGGTCCGG GGGGACCGGG CGCTGTTGCG CATCGCCGTG GCGAACCTCT TGTCCAACGC CTGGAAGTAC ACCTCCAACG TTGCTATGAC CCTGATAGAA CTCGGCTCTT TCAGCAGCGA CCAGGGGGAG CTCGTTATAT TTCTGAGAGA CAACGGCGCA GGGTTCGACA ACGCCCGTGC CGATGAGCTC TTCAAACCGT TCAGGCGCCT GCATTCCGCC CTGGAGTTTC CCGGTACCGG CCTTGGGCTC GCCACGGTGC GTCGCATCAT CCGCCGGCAC AACGGCCAGA TCTGGGGAGA CGGCACACCC GGGGGCGGCG CGACTTTCTA CTTTACCGTC AACGACTGA
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Protein sequence | MELKSSLFCW ARLSEPGAKS FLLQALLGGV LTFLFWLLQA AIDYFLFDGN SFYRYLLHPD RHQAAEFSLV VFLVCCLLLY SRHSHQLQAK LQAALKAALD KSEDDKAKLR GIVEAMGDAI SIQAPDMTIV YQNRAHVEMM GQHVGEPCYQ AYRQEKETCP ACHLAAAFAD GKVHRSKVSP EPGNGDRYVE ITGSVLNGAD GRPSLGIEVV RDVTAQRLVE REAAQLNLAL TRQAGELKQV NRELEAFCLA VAHDLRAPLT RIYSSAQELQ GYGELLDENG RFFVSLVNDG CVQMESMIDA LMVLCHVTEM EMAPAPVDLV ELAQELVAQL QLDTPGREVT VRLPERLVVR GDRALLRIAV ANLLSNAWKY TSNVAMTLIE LGSFSSDQGE LVIFLRDNGA GFDNARADEL FKPFRRLHSA LEFPGTGLGL ATVRRIIRRH NGQIWGDGTP GGGATFYFTV ND
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