Gene GM21_1754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_1754 
Symbol 
ID8137085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand+ 
Start bp2043922 
End bp2044410 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content62% 
IMG OID644869366 
ProductdTDP-4-dehydrorhamnose 3 5-epimerase and related enzymes-like protein 
Protein accessionYP_003021566 
Protein GI253700377 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones83 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGGA TAACCAGTTT CACCAAAGGG CGCATCCACG ACGTGGTGCT TAAGCCGCTG 
GGGAAGTTCC TGGACGAGAG GGGTTGGCTT TGCGAGCTTT TCCGTAGCGA CGAGCTGGAG 
CCGTCTGTGC TTCCGGCCAT GACCTATGTC TCGATGACCC AACCGGGGGT GACCCGCGGG 
CCGCACGAGC ACGTCGAGCA GACCGACTAC TTCTGCTTCA TGGGTCCTTC CAACTTCAAG 
GTCTACCTTT GGGACACGCG CCCCGATTCC CCGAGCCGCG GGGTCAGGCA GGTGGTCTAC 
GCCGGCCTCG ACGCTCCGAT GGCGATGATA GTTCCGCCCG GAGTGGCTCA TGCATACCGC 
AACGTAGGGT GCGAGAACGG CATCGTCTTC AACGCGCCGA ACCGGCTCTA TGCCGGAGAG 
GGAAAGCGCG AGCCGGTGGA CGAGATCCGG CACGAAGAAG CGGCCGACTC GCCTTACCTG 
ATTGATTAG
 
Protein sequence
MSGITSFTKG RIHDVVLKPL GKFLDERGWL CELFRSDELE PSVLPAMTYV SMTQPGVTRG 
PHEHVEQTDY FCFMGPSNFK VYLWDTRPDS PSRGVRQVVY AGLDAPMAMI VPPGVAHAYR 
NVGCENGIVF NAPNRLYAGE GKREPVDEIR HEEAADSPYL ID