Gene GM21_1600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_1600 
Symbol 
ID8136931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp1866477 
End bp1867196 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content63% 
IMG OID644869213 
Productpyridoxine 5'-phosphate synthase 
Protein accessionYP_003021413 
Protein GI253700224 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0854] Pyridoxal phosphate biosynthesis protein 
TIGRFAM ID[TIGR00559] pyridoxine 5'-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones89 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTAGGC TGGGAGTGAA CATAGATCAT GTGGCGACGC TTCGGCAGGC GAGGGGGGGG 
ACGGAACCGG ACCCGGTCGC AGCCGCCGCC ATCGCCGAAT TTGCCGGTGC CGACGGCATC
ACCATCCACC TGCGCGAGGA CAGAAGGCAC ATCCAGGACC GCGACCTGAA GATCCTGCGC
CAGACGGTGC AGACCAGGCT GAATCTGGAG ATGGCCGCGA CCGACGAGAT GGTCGCCATA
GCGCTCTCGG TCAAGCCCGA GGCGTGCACG CTCGTCCCCG AGAAACGGGC CGAGCTCACC
ACCGAGGGGG GGCTCGACGT GCGCATCCAC CAGGAGGCGC TCAAGCTCGC CATCGAGAAA
CTGCAGGCAG GGGGGATCAT CGTCAGCCTC TTCATCGATC CCGATCCGGA CCAGATCAAG
GTCGCCAACA AGATCGGCGC CGACTATATC GAGATCCACA CCGGCTCCTT CGCCGAGGCG
AAGAGCTGGA AGGAAGAGGA ACTGGAACTG ATCAAGATAG AGAACGCCGT GAAGCTCGCC
CGCAAGCTCG ATCTCGGCGT CAACGCCGGG CACGGCCTCA ACTACAACAA CGTGAAGAAG
GTGGCGGCCA TCGGCGGCAT CGAGGAATTC AACATCGGGC ATTCCATCAT GTCCCGCGCC
ATCCTGGTGG GACTGGACCG CGCCGTGCGC GACATGTCAG AGCTGGTGAG ATACGCCTGA
 
Protein sequence
MARLGVNIDH VATLRQARGG TEPDPVAAAA IAEFAGADGI TIHLREDRRH IQDRDLKILR 
QTVQTRLNLE MAATDEMVAI ALSVKPEACT LVPEKRAELT TEGGLDVRIH QEALKLAIEK
LQAGGIIVSL FIDPDPDQIK VANKIGADYI EIHTGSFAEA KSWKEEELEL IKIENAVKLA
RKLDLGVNAG HGLNYNNVKK VAAIGGIEEF NIGHSIMSRA ILVGLDRAVR DMSELVRYA