Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_1391 |
Symbol | |
ID | 8136719 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | + |
Start bp | 1639123 |
End bp | 1640694 |
Gene Length | 1572 bp |
Protein Length | 523 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644869005 |
Product | diguanylate cyclase/phosphodiesterase |
Protein accession | YP_003021208 |
Protein GI | 253700019 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 69 |
Fosmid unclonability p-value | 0.281383 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGCGCG GCGTAATACG CAGGTTTTTC CGCTGGATAG GTGGGCTTTC CCCCGCCGCC ATCAGCGCCA TCTTCGCCTT CAGCAGCCTC TCTTGGCTCC TTCTCGCCCA CCTCCTCTTC CGTAGTTTTC TCGCCGACCG CGAACTCACC TACCTCGCCC TCAGCATCCT CGAGCTTGTC GGGGTCGCCA CCATGACCGT CATCGTCTAC CTGCTCAGCG ACAAGAGCGA AGCAAGGCAT CGCGCCACCG AGCTGAGCAT CCGCGAGCAG GCCATACGAG ACGGACTCAC CGGGCTCTAC AACCGCCAGG CTTTCGACGA TTTCCTGGCG CAGTCCATCG AATACGCAAA ACGCCGCAGG GAATCGGTCG CCCTGTTGTT TCTCGACCTC GACCGGTTCA AATTCGTCAA CGACAGGCGC GGGCACTTCG CGGGAGACGC GGTCCTCATC GAGACGGCGC GACGGCTCAC CGACTGCGCC AAGCGCGGAG AGGACCTGGT GGCCCGGGTG GGGGGGGACG AGTTCGCCAT GCTGCTGCGC CACCCCGAAA TGCCTGACGG GCCGGGGGTT GTCGCCAAGC GTGTGCTGGA GGCGTTGTCG GCGCCGGTGC AGGTGGATGC CGAGACGCTC AAGACCAGCG TCAGCATCGG CATAGCCATG TTCCCTTCCG ATGCCGACGA TCCCATGCAG CTCTTCAAGA TGGCGGATCT CGCCCTGAAC CAGGCGAAGC AGCAGGGACG CTCGACCTTC TGCTTCTACG GGGGAGAGTG GCGCGAAGAG CGCGACCATA CCCTGCAGTT GGAACAGGGG CTCTTGCGGG CCATCAACTA CGGCGAGTTG TTCCTGGTTT ACCAGCCGAA GCTGGATACT TCGAACATGC GCGTCATAGG GGTGGAGGCG CTGGTGCGCT GGAACCATCC GCACCTGGGG GTGCTCGGGC CGGCGAGCTT CGTCCCCATC GCCGAGAAGG CGGGCCTCAT CTGGCCGCTG ACCGAGTGGG TGCTTAAAAG CGCCTGTTCC CAGGCGGCCA ACTGGTACCG CAACGAGGGG CTGGACCTGA ACGTCGCGGT CAACCTCTCC CCTTCCGTTT TCTCGCATCA GGACCTGGAA GAGGTGATCG AGAAGGCGCT GAACGACAGC AAACTTCCCC CGGACCGGCT CACGCTTGAG ATCACCGAGC AGTCGCTGAT GATCTACGAG ACCGAGGCGC TCGGGGTGCT GGAGCGTCTG CAACGGATGG GAACCAACAT CCAGATCGAC GACTTCGGCA CCGGCTACTC GTCCCTCTCA TCTCTCAAGC ACTACCACTT CCAGGCGCTC AAGATCGACA AGTCCTTCGT CAGCGACGTC GTCACCTCTT CGGACGACGC CGCCATCGCC ACCACCATCA TGTTCATGTC CAAGTGCCTC GACATGGAGG CGATCGCCGA GGGGGTGGAA TCCGAGGCGC AAAAGGAATT CCTCGCCTCC ATCGACTGCC GCTACATGCA GGGTTTTTAT TTCTCCAGAC CCCTGGCCGC TTCTGAAATG GCCGCTTTCG TCAGGCGTCT CCCCGACGAC AAGAAAGCTT GA
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Protein sequence | MERGVIRRFF RWIGGLSPAA ISAIFAFSSL SWLLLAHLLF RSFLADRELT YLALSILELV GVATMTVIVY LLSDKSEARH RATELSIREQ AIRDGLTGLY NRQAFDDFLA QSIEYAKRRR ESVALLFLDL DRFKFVNDRR GHFAGDAVLI ETARRLTDCA KRGEDLVARV GGDEFAMLLR HPEMPDGPGV VAKRVLEALS APVQVDAETL KTSVSIGIAM FPSDADDPMQ LFKMADLALN QAKQQGRSTF CFYGGEWREE RDHTLQLEQG LLRAINYGEL FLVYQPKLDT SNMRVIGVEA LVRWNHPHLG VLGPASFVPI AEKAGLIWPL TEWVLKSACS QAANWYRNEG LDLNVAVNLS PSVFSHQDLE EVIEKALNDS KLPPDRLTLE ITEQSLMIYE TEALGVLERL QRMGTNIQID DFGTGYSSLS SLKHYHFQAL KIDKSFVSDV VTSSDDAAIA TTIMFMSKCL DMEAIAEGVE SEAQKEFLAS IDCRYMQGFY FSRPLAASEM AAFVRRLPDD KKA
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