| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_1088 |
|---|
| Symbol | |
|---|
| ID | 8136410 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | + |
|---|
| Start bp | 1275476 |
|---|
| End bp | 1279933 |
|---|
| Gene Length | 4458 bp |
|---|
| Protein Length | 1485 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644868699 |
|---|
| Product | protein of unknown function DUF490 |
|---|
| Protein accession | YP_003020907 |
|---|
| Protein GI | 253699718 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2911] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.000000343401 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGACGGG TGGCGCTCTA CCTGGGCGGC GCCGTCCTGG CCCTCGCCCT GACCGTCTTC
GCCGGCCTCA TCTGGCTCGT CGGCACCAGC TCCGGCGCCC GCTTCGCGCT CACCACGCTC
GACCGCTTCG CCGGCGTCGA GGTCTCGGTG CAAAAGGTGG AGGGGAGGCT TCGGGATCGC
CTTATTTTGC GCGGCGTCAC CGTTTCGCGG CCGCGGATGC TGGTCCGGGT GGAAGAGCTG
CGTCTGGTCT GGGATCCCGA GCGCCTTTCC GGGGGGAAGC TCCTGGTGCA TGAACTCGCC
CTTCGGGGGG TGCGGATTCA GGACGACACC CCCCTCAGCG AAAAAGCCCC CGAACTGCGC
TGGCCCCAGG TGAGCGAGGT GGTGCGCAGG ATAGATGCGG AGGTGACCCG CTTCTCGCTC
AAGGACCTAA GCTACCGGCA CCTGCAGCAG CCCCCCTCGC AGCTAAAGGA ACTCGCGGCC
TCGCTAGCGC TCAGGCAGGG GACGCTGACC CTTACCGGGG GGAGCATTTC GGCCTCCCAG
GGGACCGCTT CAGGGGAGCT GGCCGCGGGG CTCTGGCGCC CATCCCTCTC GCTAGACCTG
CGCCTCAACC CCTCGGCCGC CGTGGCGGAT ATGGACGCCT TTTTCGTGCA GGCGAAGCTT
TCGCCGGGAA CTGCCCCCGA GCAGATGGCG GGGCCGCTGG CGATAGCGGG TAAGCGAGGG
GGGGCGCCGC GCCTGGAGCT TGAAAGCGTA CTCGGCATCA CCGGCACCGG TTTCAACCTC
AGAAATCTGA AGCTGGTGCG CCCGGGGCGC CGCGGCACCT TGTCCGGCAG CGCGAGCATG
ACCCTCACCA GGACCGAGCC GCTCTTCACC CTCGCCCTCA GGGCGGCGGA ACTCGACCTC
TCCAAGGAAC TCAACACCCC CCTCCTCATC TCAGGCACGC TCAACTTCTC CGGGACCCCG
TCCGGCTATC GGGGGGAGTT CTCCCTGGCG AACCAGGGGG AGGGGTGGCG CAAAGCCGCC
CTCGCCGCCG GCTACCGCGG CGGCAAAAGC GGCGTGAAGC TCGCGCCGCT TTCCGGGGAG
TGGCTGGGGG GAGGGGTGCG CGGTGCGCTG GATATCGGTT GGGAGAAGGG AGTGCTGGTG
AGCGGGAAGC TCGCGGGGAG AAGGCTCGAT CCCTCGCAGC TGGCGGCGGG CTGGAAAGGG
GTCGTCAACC TGGACCTGGC CGGCAGCGTC GACGTGCCGG AACAGGGGGA GGTCCGGGGG
AGCCTGGACG CGCATCTGCT TCAGAGCAGG CTGCAGGGGC ACGAACTGCG CGGCGACCTG
CAGGGGAGCT TTTCCGGCGA GACCATGCTG GTAAAACGCC TGGTCCTGGC CGGAAAGGGG
TTCAGCGCCC GCGGCTCGGG GCAGCTCGAC CGCCGTTTCG ATTTCTCGGC CGACGTGAGC
GATCTCTCCG GGGTGGTGCC GGCCGCGTCG GGCGAGCTGC GGGGGTGGGG ATGGTTCAGG
TGGCGCGACG GCGCCTTGAG CGGTGCGGTG AGCGGCAACG GGCGCGACAT AGCCGCTTCC
GGCGGCCGCG TAGGCTCCCT GGAAGTGAAG GCGAGCCTAG GCGATGGGAA CGGGAACCCG
GTGCATCTGG ACGCGGCCTT GAGAGGGGTC TCTTTTGGCA AAGCGCAGGC GGATACGGCG
CACCTCTCGC TGGAGGGGAC GCTGGCGCGA CACCGGCTTG AGGCTCGGCT TGCCTCCGGG
GAGAACCACG CCGAGCTGAG CCTTTCGGGG GGGTACGGCG GCGGCGAGTG GCGCGGCGAG
CTCCTGCGCT TCTCCGGCGC CGACAGCGTC GGCCCCTTCG CCCTCGCGGC CCCGGCGACG
ATCGTCGCGG GAGGAGGGCG CTTCTACCTT TCTCCGCTGG TATTGGTCGG GGCGCAGGGG
GAGCGGGTGA AGTTGGCCGG GAACCTGGAG CGGGATAAGA CCGGTTCCCT TCGCGCCAGC
TGGAGCGCGT TGAACCTCTC CCGCGCCAAC TACTGGGTAA GCGGCGGCGA ACTTAACGGC
AAGAGCTCCG GTGAGGTGGA GGTCGCCTTC CTGCGCCGCA GGCGGATCAA TGTCTCCGGA
CATGCGGAGG CTGACGGGGG GATGCTTATC GACGGGCAGC GCTTCGACCT GGAGCGGTTC
CAGGCCAGCG TCACCGGCGG AGCCGGCGGC CTCACCGCCC TGGTCGACCT CGCCCTCAGG
GAGGGCGCCG GCGCGGCCCG TATCGATTTC CACACCAATG AGCCCGCGTC GCTCTCGCTC
CCCAACCGCG GCGATCTCTC CCTCAGTCTC TCGAGCCTCG ACCTCGCGCT GCTGCGCCCC
TTCCTACCCG CCGGGATGCT GCTGGACGGA AGGGTGGGGG GGGACGTAAC CGGGAGCCTG
CTGCCCGGCG GCAGGGTCGA CGTGAAGGGG GAAGGTACCG TTTCCGAGGG TCATCTCAAC
TGGCTCTCCC AGGGGGAGGA ATTCGATGCC TCACTGGAGC AGGCCGGTAT CGGCTTTGGT
TGGCGCGGCC GGATCGATCC CGCCAAGGGG AGGCGCGGAG AGCTGACCCT GAGTGCCCGC
GCCGCGGCCA CGGGAACCTA CACCTCCAAC GGGGAGCGGA TGCTGGTGGC GAAGAGTACG
CTGCGGCTGG ACGCGGACAA AACCGGCAGC CGTGCCGCCG TCGACCTCAC GCTGGATCAA
GGGGGGAGCC TGACCGCCGC CTTCTTCTCC AACTCCCCGG CCGGGTTCAA CATCCCGGAG
ACCGGCGACC TTTCCGCTCG CTGGAGCGGC ATCCGCCCTG AGCTCTTGAA GCCGTGGCTT
CCCGGGACGC TGGACCTGAA GGGGGAGCTT AACGGCCAGG CCAACGGCAG GCTCATGCCG
GGGCAGCGTT TGGAGCTGGC CGGCGAGGCC GGCTTCTCCC AGGGGAGGGC GAGCTGGCAG
GGGGGCAACG GAGAGATCGG CGCCAACCTC CGTTCGGCCA CGCTCACCTT CGCCTGGCGC
GGCGAGACGC TCACCGCCGA CCTGGCGCTG GCGCTGGCCG ACTACGGGCA GGCTCAGGGG
AACATCCTGC TTCCCATTCC GGCCCGGCTA CCCGTGGCGC CGGACCCGCG AGGCGCGGTG
CGGGGGAGCT TCGCCGGCAA GGTGAAGGAA AAGGGTTTCC TCACCTCGCT TTTCCCTGGG
CTGGTACAGG AGACCCACGG CGCCCTGGAT CTCGACCTCA CCCTGGGCGG CACCTGGGGC
GATCCCACGC TGGCGGGGAG CCTGCGGCTC GCCGATGCCG GAGCCTACCT CCCGAGCGCC
GGGATCCGCC TCACCGGCGT GGAGCTCTCC GCGCTGCTCA CCCATGACCA GATACGCATA
GAGCGGCTGC GCGCCCGCTC CGGGGAGGGG GAACTGGTGG GGAACCTGCT GCTGCATCTA
AACGGCAGGG AGATCACCGG GTACACCGGC ACCCTGAGCG GACAGCGGTT CCAGACCGTC
TACCTGCCGG AACTCCGCAT GATGACCTCG CCGCAGCTCA CCTTTAAGGG AGAGGGGGAG
CGGGTGACCC TGCAGGGGGA GATCGGGGTC CCCGAGATGC TGATCCTGGG GTCGCCGGCG
CACCAGGTGG AAACGGCTAG CTCCGACGTG ATCCTTGAGG GGGCGCCGAC GGGAAGCGGG
GGAAAGCCCT TCCCGCTGGT ACTGGACGGG CGGGTCAAGG TGGTGTTGGG CGACAAGGTC
ATGGTGCAGG CCTCCGGCAT CGACGCGCGC CTGGTCGGGG ACATGGACCT CGTCTTGAAG
GGAATCGACA ACATCGAGAG CTCCGGCGAG ATCCGCGTGG TCCAGGGGCG CTACCGCGCC
TACGGCATGG ATCTGGAGAT CGTGCGCGGA CGCATCTACT ACGTGAACGA CCCGGTGGAC
CGTCCCACGC TCGACATCCT CGCGCTGCGC ACGGTGGGCG ACGTCAAGGC CGGTGTCACC
GTGGGTGGAT TCTTGAACAC CCCGGTGGTG AAGCTGTATT CCGAGCCTCC CATGCCCGAG
GTCGACATCC TCGCCTACAT GGTTTTAGGC CACCCGCTCG GCGCGAGCGG CGAGCAGGGG
GCGCTTTTGG CAACAGCGGC AGCTTCCCTA TTTTCCTTTG GCAAGTCCGA ATCCGTGCAG
GAACAGGTCA AGGACCGGCT GGGGCTGAGC ACGCTCGGGG TCGAGACGGT GGATACCTCC
AGGGCCGGAA GGATGGGGTA CAAAGAGCTA CCGACCACCC CCGGCGGCGC CGCCGCGGCC
GAACCCGCAG GCGGGCAGTC CCTGTTCACC GTCGGCAAGT ACCTGACCCC GGAGCTTTAC
TTAAGCTACG GGCGCTCGCT CATCACCGGG GAAAACCTCT TCAGGCTCCG TTACGACATC
CACCGGCGCT GGCAGATAGA GACCCAAAGC GGCAGCGAAA GCGGCGCCGA CCTCTACTAC
AAGCTGGAGT TCGACTAG
|
|---|
| Protein sequence | MRRVALYLGG AVLALALTVF AGLIWLVGTS SGARFALTTL DRFAGVEVSV QKVEGRLRDR
LILRGVTVSR PRMLVRVEEL RLVWDPERLS GGKLLVHELA LRGVRIQDDT PLSEKAPELR
WPQVSEVVRR IDAEVTRFSL KDLSYRHLQQ PPSQLKELAA SLALRQGTLT LTGGSISASQ
GTASGELAAG LWRPSLSLDL RLNPSAAVAD MDAFFVQAKL SPGTAPEQMA GPLAIAGKRG
GAPRLELESV LGITGTGFNL RNLKLVRPGR RGTLSGSASM TLTRTEPLFT LALRAAELDL
SKELNTPLLI SGTLNFSGTP SGYRGEFSLA NQGEGWRKAA LAAGYRGGKS GVKLAPLSGE
WLGGGVRGAL DIGWEKGVLV SGKLAGRRLD PSQLAAGWKG VVNLDLAGSV DVPEQGEVRG
SLDAHLLQSR LQGHELRGDL QGSFSGETML VKRLVLAGKG FSARGSGQLD RRFDFSADVS
DLSGVVPAAS GELRGWGWFR WRDGALSGAV SGNGRDIAAS GGRVGSLEVK ASLGDGNGNP
VHLDAALRGV SFGKAQADTA HLSLEGTLAR HRLEARLASG ENHAELSLSG GYGGGEWRGE
LLRFSGADSV GPFALAAPAT IVAGGGRFYL SPLVLVGAQG ERVKLAGNLE RDKTGSLRAS
WSALNLSRAN YWVSGGELNG KSSGEVEVAF LRRRRINVSG HAEADGGMLI DGQRFDLERF
QASVTGGAGG LTALVDLALR EGAGAARIDF HTNEPASLSL PNRGDLSLSL SSLDLALLRP
FLPAGMLLDG RVGGDVTGSL LPGGRVDVKG EGTVSEGHLN WLSQGEEFDA SLEQAGIGFG
WRGRIDPAKG RRGELTLSAR AAATGTYTSN GERMLVAKST LRLDADKTGS RAAVDLTLDQ
GGSLTAAFFS NSPAGFNIPE TGDLSARWSG IRPELLKPWL PGTLDLKGEL NGQANGRLMP
GQRLELAGEA GFSQGRASWQ GGNGEIGANL RSATLTFAWR GETLTADLAL ALADYGQAQG
NILLPIPARL PVAPDPRGAV RGSFAGKVKE KGFLTSLFPG LVQETHGALD LDLTLGGTWG
DPTLAGSLRL ADAGAYLPSA GIRLTGVELS ALLTHDQIRI ERLRARSGEG ELVGNLLLHL
NGREITGYTG TLSGQRFQTV YLPELRMMTS PQLTFKGEGE RVTLQGEIGV PEMLILGSPA
HQVETASSDV ILEGAPTGSG GKPFPLVLDG RVKVVLGDKV MVQASGIDAR LVGDMDLVLK
GIDNIESSGE IRVVQGRYRA YGMDLEIVRG RIYYVNDPVD RPTLDILALR TVGDVKAGVT
VGGFLNTPVV KLYSEPPMPE VDILAYMVLG HPLGASGEQG ALLATAAASL FSFGKSESVQ
EQVKDRLGLS TLGVETVDTS RAGRMGYKEL PTTPGGAAAA EPAGGQSLFT VGKYLTPELY
LSYGRSLITG ENLFRLRYDI HRRWQIETQS GSESGADLYY KLEFD
|
|---|
| |