Gene GM21_1085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_1085 
Symbol 
ID8136407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp1271415 
End bp1272626 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content66% 
IMG OID644868696 
Productpeptidase M20 
Protein accessionYP_003020904 
Protein GI253699715 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0000000000000939958 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCGGGC GCCTGGAGGA GGTTTTCGCC GCAATGGATC CGGCACGGCT CAAGGGGACC 
CTGCTGGAGA TGCTGGACGT GTACTCACCA TCCGGGAAGG AGGAGGACAT CCAGCTCTAC
CTTGAGGACC TATTGGCGGG TGCCGGGTTC TACGTAGAGC GGCAGGAGGT GGAGGAGGAG
CGCTACAACC TGCGGGTGAC CATGGGGGAA GGCGAGCCCG AGCTTTACCT CGTGGGGCAC
GTGGACACGG TCCCGGCGTG GGACCTGGAG GAATTCGGCG CCAGGGAGAA AGGCGACGTC
ATCGGGGGGC TGGGGAGCGC CGACATGAAG GGTGGCTGCG CCGCCATGAT CGAGGCGTGG
CTCGCCATAG CCCAGGCCTT GAAGCCGACC CGGCGCCCGA ACGTGGGGCT ATTGCTCGTG
GTCGGGGAGG AGGAGAACGG CGACGGCAGC GCCAGTTTCC TGAAAAGCTG CAGTCCCGCC
TGGGCCGTGA TCGGGGAGCC TACCGGCCTC TCCGCCTGCT TCGCCCACTA CGGCTACCTT
GAGGCCGGCT TCGTCACCCA CGGGTTGAGA AGCCACTCCT CGCTGCCGGA GTTGGGGCAC
AACGCGGTGG AATCGATGCT GAGGGTGCTT TTGCACCTGA GCAAGGACCC GCTCTTCAAC
CGGGAGCATG GGAACATCGT CTATTCCATC AGGGAGATGC ACTCTTCCCA GAAGGGATTC
GTGGTCCCGG ACCGCTGCGA ATCCTGGATC GATCTGCATC TGCCGCCGGA GCTCGACCCG
GAGTCCGTGC AGCGGGACAT AAGCCGTGTC GTCTCCAGCG CGGGGCAGTA CATCCCCGGC
CTCGACCTAA ACGTCGCCTT CAATTTCGCC TCGGCCGGGT ACAACCTCGG TACCGACAAC
CCCCTGGCGT GCATACTGGA GCAGGTGTAC CCCCAGCTTG GGCGCACCCT GAAGTTCGAC
TCCTTCCGCT CGCACTCCGA CGGCAACCTC TTCTACGCCG CCGGCTGCCG GCCGCTGATT
CTGGGCCCCG GCGCGCTGGA GATATCGCAC ACCCCGGAAG AACAGGTCGA CTTCCCCGAG
GTCCTGGCGG CGGCACGGAT CTATGCCGCA CTTTGCCTGG GGATGGACCG GTACGCTGTG
CTGAACGTGG AGCGCTGCGG CTCCTGGGCG TCGTTTGACA GGCAGGCCAC CTGGGCGGGC
TGCCGGGATT AG
 
Protein sequence
MTGRLEEVFA AMDPARLKGT LLEMLDVYSP SGKEEDIQLY LEDLLAGAGF YVERQEVEEE 
RYNLRVTMGE GEPELYLVGH VDTVPAWDLE EFGAREKGDV IGGLGSADMK GGCAAMIEAW
LAIAQALKPT RRPNVGLLLV VGEEENGDGS ASFLKSCSPA WAVIGEPTGL SACFAHYGYL
EAGFVTHGLR SHSSLPELGH NAVESMLRVL LHLSKDPLFN REHGNIVYSI REMHSSQKGF
VVPDRCESWI DLHLPPELDP ESVQRDISRV VSSAGQYIPG LDLNVAFNFA SAGYNLGTDN
PLACILEQVY PQLGRTLKFD SFRSHSDGNL FYAAGCRPLI LGPGALEISH TPEEQVDFPE
VLAAARIYAA LCLGMDRYAV LNVERCGSWA SFDRQATWAG CRD