Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_1085 |
Symbol | |
ID | 8136407 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 1271415 |
End bp | 1272626 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644868696 |
Product | peptidase M20 |
Protein accession | YP_003020904 |
Protein GI | 253699715 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0000000000000939958 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACCGGGC GCCTGGAGGA GGTTTTCGCC GCAATGGATC CGGCACGGCT CAAGGGGACC CTGCTGGAGA TGCTGGACGT GTACTCACCA TCCGGGAAGG AGGAGGACAT CCAGCTCTAC CTTGAGGACC TATTGGCGGG TGCCGGGTTC TACGTAGAGC GGCAGGAGGT GGAGGAGGAG CGCTACAACC TGCGGGTGAC CATGGGGGAA GGCGAGCCCG AGCTTTACCT CGTGGGGCAC GTGGACACGG TCCCGGCGTG GGACCTGGAG GAATTCGGCG CCAGGGAGAA AGGCGACGTC ATCGGGGGGC TGGGGAGCGC CGACATGAAG GGTGGCTGCG CCGCCATGAT CGAGGCGTGG CTCGCCATAG CCCAGGCCTT GAAGCCGACC CGGCGCCCGA ACGTGGGGCT ATTGCTCGTG GTCGGGGAGG AGGAGAACGG CGACGGCAGC GCCAGTTTCC TGAAAAGCTG CAGTCCCGCC TGGGCCGTGA TCGGGGAGCC TACCGGCCTC TCCGCCTGCT TCGCCCACTA CGGCTACCTT GAGGCCGGCT TCGTCACCCA CGGGTTGAGA AGCCACTCCT CGCTGCCGGA GTTGGGGCAC AACGCGGTGG AATCGATGCT GAGGGTGCTT TTGCACCTGA GCAAGGACCC GCTCTTCAAC CGGGAGCATG GGAACATCGT CTATTCCATC AGGGAGATGC ACTCTTCCCA GAAGGGATTC GTGGTCCCGG ACCGCTGCGA ATCCTGGATC GATCTGCATC TGCCGCCGGA GCTCGACCCG GAGTCCGTGC AGCGGGACAT AAGCCGTGTC GTCTCCAGCG CGGGGCAGTA CATCCCCGGC CTCGACCTAA ACGTCGCCTT CAATTTCGCC TCGGCCGGGT ACAACCTCGG TACCGACAAC CCCCTGGCGT GCATACTGGA GCAGGTGTAC CCCCAGCTTG GGCGCACCCT GAAGTTCGAC TCCTTCCGCT CGCACTCCGA CGGCAACCTC TTCTACGCCG CCGGCTGCCG GCCGCTGATT CTGGGCCCCG GCGCGCTGGA GATATCGCAC ACCCCGGAAG AACAGGTCGA CTTCCCCGAG GTCCTGGCGG CGGCACGGAT CTATGCCGCA CTTTGCCTGG GGATGGACCG GTACGCTGTG CTGAACGTGG AGCGCTGCGG CTCCTGGGCG TCGTTTGACA GGCAGGCCAC CTGGGCGGGC TGCCGGGATT AG
|
Protein sequence | MTGRLEEVFA AMDPARLKGT LLEMLDVYSP SGKEEDIQLY LEDLLAGAGF YVERQEVEEE RYNLRVTMGE GEPELYLVGH VDTVPAWDLE EFGAREKGDV IGGLGSADMK GGCAAMIEAW LAIAQALKPT RRPNVGLLLV VGEEENGDGS ASFLKSCSPA WAVIGEPTGL SACFAHYGYL EAGFVTHGLR SHSSLPELGH NAVESMLRVL LHLSKDPLFN REHGNIVYSI REMHSSQKGF VVPDRCESWI DLHLPPELDP ESVQRDISRV VSSAGQYIPG LDLNVAFNFA SAGYNLGTDN PLACILEQVY PQLGRTLKFD SFRSHSDGNL FYAAGCRPLI LGPGALEISH TPEEQVDFPE VLAAARIYAA LCLGMDRYAV LNVERCGSWA SFDRQATWAG CRD
|
| |