Gene GM21_0833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_0833 
Symbol 
ID8136149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp989136 
End bp990044 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content57% 
IMG OID644868447 
Producttranscriptional regulator, AraC family 
Protein accessionYP_003020661 
Protein GI253699472 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones105 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAGCA GGACAAAAGC GGCGCGCGAA GTTTTGAGAG GGGACATTGC CCGATGGACG 
AACAACGGGA TACAGGGTCC AACGGCGGTC CCTGGCCTAT CGTTATTTCG GCAAGACGAG
CTAACCGAAC CTATGAGCGT GGTGTACGAG CCCAGCATCT GCATGGTCGT GCAGGGGTCC
AAGCGCGTGC TGGTTGGGAG CGAAACGCAT GTGTATGACG ATCATCATTA CTTGATCACG
TCGGTGGACC TGCCGTCCTT CGTTCAGGTC ATAGAAGCAA CAAAAGACAG GCCCTTGCTG
GGGCTGCAGT TGAAGTTCGA CATAACCGAG ATTTCTCAAC TGCTACTGGA CGGGAATTTC
CCGCATCATC GTCAGCAGCA GTCCGGCCAT GGCATGGCTA CTAGCGAGGT CACCCTGCCC
CTGCTCACCG CCTTTCAGCG CCTGATCGAC CTGCTTGATG AAGAGCATGA CATTCCGATC
CTTGCGCCGA TCATACAGAA GGAGATCACC TACCGCCTGC TGCTAGGGGA ACAGGGCGCG
CGTCTGCGCC AGGTAGCAAT GGCAGGAAGC CAGAGTCAGC AGATAGCGCG GTCCATCGGA
TGGCTGAAGA GCAACTTCAA GCAACAGCTT CGCATCGAAG ATCTCGCATC CCAGGCACGC
ATGAGCACCT CATCCTTTCA TAATCATTTC CGGTCCATGA CCGCCTTAAG CCCATTGCAG
TACCAAAAAC ATCTGCGCCT GCACGAGGCC AGGCGTTTGA TGCTGGCCGA GTCGTTGGAT
GCCGCAACCG CCGCGTTTCA AGTAGGCTAT GAGAGCCCCT CCCAGTTCAG CCGCGAGTAT
AACCGCCTCT TCGGCGCACC ACCGCTGCGG GACATCTCGA AATTCCGTCA GACGTCGTCA
GGTCAATAG
 
Protein sequence
MDSRTKAARE VLRGDIARWT NNGIQGPTAV PGLSLFRQDE LTEPMSVVYE PSICMVVQGS 
KRVLVGSETH VYDDHHYLIT SVDLPSFVQV IEATKDRPLL GLQLKFDITE ISQLLLDGNF
PHHRQQQSGH GMATSEVTLP LLTAFQRLID LLDEEHDIPI LAPIIQKEIT YRLLLGEQGA
RLRQVAMAGS QSQQIARSIG WLKSNFKQQL RIEDLASQAR MSTSSFHNHF RSMTALSPLQ
YQKHLRLHEA RRLMLAESLD AATAAFQVGY ESPSQFSREY NRLFGAPPLR DISKFRQTSS
GQ