| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_0518 |
|---|
| Symbol | |
|---|
| ID | 8135829 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | - |
|---|
| Start bp | 640471 |
|---|
| End bp | 641247 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644868137 |
|---|
| Product | SOS-response transcriptional repressor, LexA |
|---|
| Protein accession | YP_003020356 |
|---|
| Protein GI | 253699167 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
|---|
| TIGRFAM ID | [TIGR00498] SOS regulatory protein LexA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 112 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCCTA AACAGAAGAG GGTGCTTGAT TTCATTGTTT CATTCGCCGA GCGGCACGGG
TTCCAGCCTT CGCAACAGGA GATCGCTTCG GGTTGCGGCT TCGGGTCGCT GGGGACGGTG
CAGCATTACT TGCGCGCGCT GGAGAAGGAC GGGCACCTGA CGCGCCAGTG GAACGCAAAA
CGGGGACTGC AACTGGCAAA TCCCCCCTGT CCCCCCTTCG CAAAGGGGGG GACGCGAGTT
CACGGGCAAC GCTTGGTGAG TTCATTTACT CCTGGTTCCC CGGAATTACA GAATCAACCT
TTTACAACTC TGGAAGTTGA GCAGCAGCCT TTTGCAAAGA GGGGAACTCT GCAAACGCCG
GCTGTGGCAC CGATCATAAT GGAGCTGCCG CTGGTGGGGA TCGTGGCGGC GGGGAGGCCG
GTGCAGGCTT TTCAGTTGGC GGACGCCATC GAAGTCCCTT CGGCGATGGC GGGACCGGGG
AACGTGGTGT ACGAGGTGCG CGGCGATTCG ATGGTGGAGA TGGGGATCAT GGACGGGGAC
TACGTGGCGG TGCACCAGCA GGCGGTGGCG GAGACGGGCC AGACGGTGAT CGCCGAGGTG
AACGGTTCGA TCACGATCAA GAAGTACGTC CGGAAGGGAA ACTCGATCCA ACTGCTGCCG
GCGAACTCGG CGATGAGCCC TATCGCGGTG TCGGAAGACG ACGAGTTTCA TATCAGGGGG
GTGCTGGTGG GCTCCATGAG GTTTTATAAG AAGTGGACCG GGAAATCCTC CACATAA
|
|---|
| Protein sequence | MTPKQKRVLD FIVSFAERHG FQPSQQEIAS GCGFGSLGTV QHYLRALEKD GHLTRQWNAK
RGLQLANPPC PPFAKGGTRV HGQRLVSSFT PGSPELQNQP FTTLEVEQQP FAKRGTLQTP
AVAPIIMELP LVGIVAAGRP VQAFQLADAI EVPSAMAGPG NVVYEVRGDS MVEMGIMDGD
YVAVHQQAVA ETGQTVIAEV NGSITIKKYV RKGNSIQLLP ANSAMSPIAV SEDDEFHIRG
VLVGSMRFYK KWTGKSST
|
|---|
| |