Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_0515 |
Symbol | |
ID | 8135826 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | + |
Start bp | 633236 |
End bp | 635305 |
Gene Length | 2070 bp |
Protein Length | 689 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644868134 |
Product | GAF sensor signal transduction histidine kinase |
Protein accession | YP_003020353 |
Protein GI | 253699164 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 90 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGATC GACCTCTTTA CAACAGCAAG ATAATCAACA ACTTCGTCGC CCTGCTGAAG AAGAAGCATG CGGACGTGGA CGTGCGCGAG CTGTTGGACT ACGCCGAGAT AAGCCCGTAT GAGCTGAGCG ATGAGGGGCA CTGGCTCACC CAGAGGCAGG TCGACCGTTT CCACGCCAGG GTGAACCAAC TTTTGGGGGG AAATGACCTT GCCAGGGAAG GGGGGCGCTA CGCCGCCTCC GAAGAGGCTT TAGGGGTGAT GAGGAAGTAC ACTTTAGGCC TCATCGGGCC GGCCAACACC CTGTTCGCCA TAGGCAAGTG CGCCTCCAAC TTCACCCGCT CCGCCGTCTA TAAATCCCGC AAGCTCGCAG ACAACAAGGT GGAGATCACG GTAACCCCGC GTCCCGACGT CGAGGAAAAG CCTTTCCAGT GCGAAAACCG CATCGGGTTT TTCGAGGCGA TCGTACAGAT GTTCAACTAC GACATCCCCT CCATCGAGCA CCCGGAATGC ATCTTCAAAG GAGGCGCCTG CTGCCGGTAC ATTGTCTCCT GGAAAAAGAC CTGGGCCGGG AAGGTTCGTT TGATCAGGAA CCTGCAGGTG CCGGTCGTGC TCGTCCTCTA CTGGGTGCTG GACCACATTT ACCAGATAGG GCGCCTCGCC GAACTGCTGG GAGCGCTCGC CTTCATGCAA CTGGCCGCGT CGTGGCTCGT CGAGCGGCTG GAGAAGAAGG AGATCCTGGC CACGCTCGCC GGCGTGCAGG AGTCGACGGA GCAGATGATC AACCGGATCG GCGTCAACTA CAACAACGCC AGGATGGTGA ACGAGGTGGG GCAGGCCCTA AGCACGCAAA GCGGCATAAA CGAGGTGCTG GAGAAGGTGA TCGGCGCCAT AGAGAAGCGG CTGGGGTACG ACCGCTGCCT TATCATGCTG GCCGACAAGA GGAAATCGTG CCTCAGGTTC CGCACCGGGT TCGGCATCAA CGACAAACAG CGGAAAGCGC TGAAAAAGGT TTCCTTCGAT CTCACCAACC CCGGCGCCAA AGGGGCCTTC GTAACCTGTT TCCGGGAACA AAAGACGATG TACGTCGACT TCTCCGAGGT GACGCACATT CACTCCGAGC AGAGCATCGA CCTTTCAGAG GTGCTGGAGG CGCAATCCTT CATCTGCTGC GCCATTGTCT TCGAGGGAGA GTCGCTGGGG ATCATGGCGG TGGACAACAT GAAGACCCAG AGGCCGTTGA CCCAAAGCGA CATGAGCCTG TTGACCGGCC TTGCCCCCGT CATCGGCATG AGCCTTCGCA ACGCGATGCA CCTGGAGCGC GAAAGGAGGA TGGCGGAGCA GATCAGACAG TCGCAGAAGA TGGAAGCCGT GGGGGTGCTG GCGGGAGGGA TCGCGCACGA TTTCAACAAC CTGCTGACCG GTATGATCGG GTACGTCAGC CTGGCGCTGA TGACCATGAA GGAGGAGGAC CCCGCCGCGA ACTACCTGGA CCGGGTCGTA TCCGCCGCCG ATCGGGCCGC CGACCTCACC CAGAGGCTCC TGGCCTTCAG CCGAAAGCAG ATAAGCCACC CTGAGCCGGT CGACCTGAAT CAGATCGTGA ACAACGTGAG AAAGCTCCTA AGCAGGCTGG TTACGGCGAA GATCGAGCTG AAGGTCGAAC CGCGCGAAGG GATGCTGCCG GTGGTAGCCG ATTCGAGCCA GGTCGACCAG GTGGTGATGA ACCTTGTCAC CAACGCGCGG GACGCCATGC CCGCCGGAGG GACGCTGACC ATAACCACCG AAGCGATGGA GCTTACCGAG GAGTGGGTGG AGTCGCACGG TTATGGCAGT ATCGGCTCCT ACGCAGTTTT ATCCGTCACC GACACGGGGA CCGGCATGGA CGAGGCGACC AGGGCCCACG TTCTCGAGCC GTTTTTCACC ACCAAGGAAG TGGGGAAAGG GAGCGGGTTG GGTCTGGCCA TCGTGTACGG AATCGTGAAG GAGCATGAGG GGTACCTGGA AATCTGCAGC GAGCCGGGGG TCGGGACGAC GTTCAACGTC TATCTCCCGC TCTTGGCGCC TGCACCCTAG
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Protein sequence | MSDRPLYNSK IINNFVALLK KKHADVDVRE LLDYAEISPY ELSDEGHWLT QRQVDRFHAR VNQLLGGNDL AREGGRYAAS EEALGVMRKY TLGLIGPANT LFAIGKCASN FTRSAVYKSR KLADNKVEIT VTPRPDVEEK PFQCENRIGF FEAIVQMFNY DIPSIEHPEC IFKGGACCRY IVSWKKTWAG KVRLIRNLQV PVVLVLYWVL DHIYQIGRLA ELLGALAFMQ LAASWLVERL EKKEILATLA GVQESTEQMI NRIGVNYNNA RMVNEVGQAL STQSGINEVL EKVIGAIEKR LGYDRCLIML ADKRKSCLRF RTGFGINDKQ RKALKKVSFD LTNPGAKGAF VTCFREQKTM YVDFSEVTHI HSEQSIDLSE VLEAQSFICC AIVFEGESLG IMAVDNMKTQ RPLTQSDMSL LTGLAPVIGM SLRNAMHLER ERRMAEQIRQ SQKMEAVGVL AGGIAHDFNN LLTGMIGYVS LALMTMKEED PAANYLDRVV SAADRAADLT QRLLAFSRKQ ISHPEPVDLN QIVNNVRKLL SRLVTAKIEL KVEPREGMLP VVADSSQVDQ VVMNLVTNAR DAMPAGGTLT ITTEAMELTE EWVESHGYGS IGSYAVLSVT DTGTGMDEAT RAHVLEPFFT TKEVGKGSGL GLAIVYGIVK EHEGYLEICS EPGVGTTFNV YLPLLAPAP
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