| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_0504 |
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| Symbol | |
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| ID | 8135815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | + |
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| Start bp | 619769 |
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| End bp | 621172 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644868123 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase |
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| Protein accession | YP_003020342 |
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| Protein GI | 253699153 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 82 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCACGC TAAACGAAAT AGCCGAGGCA ACCGGCGGCA GGATGATCGG GGAGGGGGCG
GGCGAGGCCT CCGCGGTCAG CACCGACTCG CGCCAGGTGG CCCCGGGAGA GCTTTTCGTG
GCACTGAGGG GCGAGCGCTT CGACGGCCAC GACTTCATAA TTCCGGCGGT CTCGCAGGGG
ATAACCGTCT TCCTGGCCGA GGAGAGCTGG GCCGAGAGAC ACGAACTCCC GAAGGGGGCC
GGCGCCGTGC TGGTGCCGGA TACGCTGCGC GCTCTCGGGG ACCTGGCCGC GTACCACCGC
CGCCGCTTCA ACCTGAAGAC GGTATGCGTC ACCGGCAGCA ACGGCAAGAC CACGACCAAG
GAAATGCTGG CGCGGATCCT GGCGCAGACC GGACCGGGGC TTAAGACCGA GGGGAACCTC
AACAACCTGA TCGGTTTGCC GCTCACCATC TTCAGGCTCA CCGGCCGCGA GCGTTGGGCC
GTCTTCGAGA TCGGGATGAG CGAGTTCGGC GAGATCGACC GCCTGGCTGA GATAGCTGAG
CCCCAGGTGG GCATCATCAC CAACGCCTTT CCGGCGCACC TGGAGACCCT GGGGAGCGTG
GAGGGGGTGG CGCGCGCCAA GGGTGAACTC TTCCTGCGCC TTAAGCCCGG CTCCGTCGCC
GTCTACAACG TGGACGACCC GCTGGTCTCC GCCTGCCCGA CCCACCTGAA CGTGACCCGG
CTCACCTTTG GCCTCAGGGG GGCAGAGGTC TCCTCCGCCT CCATCCAGAG CCTCGGCAAG
AGGGGGGAGA GCTTCACCCT GAGGCTTCCT GACGGGGAAC AGCAGGTGAC CTTGTCGGCC
TACGGCAGGC ACAACATCTA CAACGCCCTC GCCGCAGCCG CAGCGGCGCA CGCGCTCGGC
GTGTCGGGCG AAGTGATCCG CCAGGGGCTG GAGGAATTCT CCCCCTACGA TAAGCGCTTC
CAGCTGGAGG AAGTGGCGGG GGTGACCCTG ATCGACGACA GCTACAACGC GAACCCCGCC
TCCATGGCGG CGGCGCTCAC CACCTTGAAG GAGCTTCAAG GGGAGGGGCG GCTGGTCGCG
GTTTTAGGCG ACATGCTGGA ACTGGGGCTT GGCACCGAAG AGGCGCATCG CGAGCTGGGG
AAACTCGCCG CGGGCAGCGT CGACCGGCTC TGCCTCTTGG GAAAACTGAT CGATGAAACG
GCCAAAGGGG CGCTCGAAGC GGGGCTTCCC GAAACCGACC TGGTGCTGGG GCGGGACCAT
GAGCAACTGG CCCAGGAGCT ACTCACCTTC GTGCAGCCGG GCGATTGCAT TCTTTTCAAA
GGATCTAGAG GCATGAAAAT GGACAAGGTG GCCAAAGCGG TGCGGCAGGG ACTGGCACCC
GCAGGAAACG GGGGGAATGA CTGA
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| Protein sequence | MFTLNEIAEA TGGRMIGEGA GEASAVSTDS RQVAPGELFV ALRGERFDGH DFIIPAVSQG
ITVFLAEESW AERHELPKGA GAVLVPDTLR ALGDLAAYHR RRFNLKTVCV TGSNGKTTTK
EMLARILAQT GPGLKTEGNL NNLIGLPLTI FRLTGRERWA VFEIGMSEFG EIDRLAEIAE
PQVGIITNAF PAHLETLGSV EGVARAKGEL FLRLKPGSVA VYNVDDPLVS ACPTHLNVTR
LTFGLRGAEV SSASIQSLGK RGESFTLRLP DGEQQVTLSA YGRHNIYNAL AAAAAAHALG
VSGEVIRQGL EEFSPYDKRF QLEEVAGVTL IDDSYNANPA SMAAALTTLK ELQGEGRLVA
VLGDMLELGL GTEEAHRELG KLAAGSVDRL CLLGKLIDET AKGALEAGLP ETDLVLGRDH
EQLAQELLTF VQPGDCILFK GSRGMKMDKV AKAVRQGLAP AGNGGND
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