| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_0395 |
|---|
| Symbol | |
|---|
| ID | 8135703 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | + |
|---|
| Start bp | 467552 |
|---|
| End bp | 469030 |
|---|
| Gene Length | 1479 bp |
|---|
| Protein Length | 492 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644868013 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_003020234 |
|---|
| Protein GI | 253699045 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 68 |
|---|
| Fosmid unclonability p-value | 0.268294 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAACG GGATCAGCTT CGGCCTGAAA GCAAAGTTCA TGCTGGTCTC CACCTTGCTC
GTGGCGCTTA CCTCAATCAC CTGGGGCGGC TGGTTCTACC TCAACGAGAG CGAGCACCTC
ATGGAGAGGC TCGAGGCGAA CGGGCGGCTC ATGCTGGACT CGATCCAGCC TCCCATCATC
GACGCGATCC TCTACGAGAG GCTGGGGGTC ATCGAGGAGA ACGCCGGACT CCTGGACAAC
TTCATAGAAC AAATCGTGGA AAACCGCGAG TTGCAGGTAG TCTATGCCTT CATCACGGAC
ACCCACGGCA AGGTGCTTGC CCACAGCGAC TACAGGGAAT TCGGCAAGAC ATATCGTGAC
CCGCTCACCG CGGCCGCTCT CACCCGTAAC CAGTTCTACG GCCACACTGC GCTGCTTCCC
TCGGTAGGGG AGATCTACGA CATGGCGATG CCGCTGCAGG TCGCGGGGAA AAGCTGGGGG
GCGCTGCGGG TCGGGGTATC GCTGGCCCGG GTGGAAAAGG AGAAGGAGCT CATGGCGCGT
GAGATAATCC TGTTCTCCGT GCTCTTCTTC CTGATAGGCA ACGTCGTCTT CTACGTGGTG
GGCTTGACCA TGTCGCGACC CCTTCTCACG CTCTCCCAAG CGATGTCTGA GGTCAACCAT
CACTCCCTGG ACGCCGTTCC CCTCCCTGCC TACATGCATC GACACGACGA GATCGGAAAG
CTGCAGCAGA GCTTCAGCGA GATGCTGGAG CGGTTGAAAA AGGCGGAGCA GGAACGGCAG
GGTGCGTTAA CGCGGCTGAT GCAGAACGAA AAGATGGCGA CCGTCGGCAA GTTGGTGGCG
GGCGTTGCCC ACGAGATAAA CAACCCGCTC ATGGTGATGT CGACAAGCCT GTTTCACCTG
GAGAAGAAGG TGCAGCCCGA GCTGGTCAAG TACATCTCCC ACCATAAGGA GGGGGTCCAG
CGCATAGAGA GCATCGTGCG CCAGTTGACC GACTTCAGCA GGGCGGGGAC CCTGGACCTG
CAGCGCGTGG CGAGCGACCA GTTCTTCCAG GAAGCGGCCG GCTTCGCGAC CCTGGCGCTC
AAGAAGTTTG AGGTCAGGTT CCAAAGCAGC AACAACGCCG ATGCAACCCT GCTCTTGATC
GACAAGGGGA AGATGCACCA GGTTGTGCTT AACCTGCTGT TGAATGCGGC CAACGCCTCC
CCCCTGGGCG GGCTCGTGCA ACTGCTTGCC TACCTGGAGG ACGGCAGCTA TTGCCTAGCC
GTCCACGACC AGGGTGGAGG GATCGCTCCT GGCGATAAGG AGCGAATCTT CGAGCTTTTC
TACACGACCA AGCCCGGCGG GGATGGGAGC GGCATCGGAC TTGCTATAAG CAAGAGCATC
ATCGAGATGC ACAAGGGAGT CATAACCTGC GAGAGCCGCC CGGGAGATAC CACCTTCCTG
ATCCGGATCC CGCTGCAAAA GGAAGCGGAC CATGGTTAA
|
|---|
| Protein sequence | MRNGISFGLK AKFMLVSTLL VALTSITWGG WFYLNESEHL MERLEANGRL MLDSIQPPII
DAILYERLGV IEENAGLLDN FIEQIVENRE LQVVYAFITD THGKVLAHSD YREFGKTYRD
PLTAAALTRN QFYGHTALLP SVGEIYDMAM PLQVAGKSWG ALRVGVSLAR VEKEKELMAR
EIILFSVLFF LIGNVVFYVV GLTMSRPLLT LSQAMSEVNH HSLDAVPLPA YMHRHDEIGK
LQQSFSEMLE RLKKAEQERQ GALTRLMQNE KMATVGKLVA GVAHEINNPL MVMSTSLFHL
EKKVQPELVK YISHHKEGVQ RIESIVRQLT DFSRAGTLDL QRVASDQFFQ EAAGFATLAL
KKFEVRFQSS NNADATLLLI DKGKMHQVVL NLLLNAANAS PLGGLVQLLA YLEDGSYCLA
VHDQGGGIAP GDKERIFELF YTTKPGGDGS GIGLAISKSI IEMHKGVITC ESRPGDTTFL
IRIPLQKEAD HG
|
|---|
| |