| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_0255 |
|---|
| Symbol | |
|---|
| ID | 8135562 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | + |
|---|
| Start bp | 305477 |
|---|
| End bp | 306703 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644867876 |
|---|
| Product | diguanylate cyclase |
|---|
| Protein accession | YP_003020098 |
|---|
| Protein GI | 253698909 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2199] FOG: GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 0.000365905 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGAAGCAAC TCCGCATTCT CCCCAAGAGC AGTTCCATCA GAAATCCCGA TTCCCTGCTG
CGCCTTTTCG TTGTCATCGC GCTTGTTTCC ACCTTCATCA TCACCATAGC GGCGGGGCTT
GTCTTCGTCG AGGTGCTGCA CCACCACGTA ATCCGCAACG CCGAAGAGGA TGCCATAAAG
GTCAGCAGCG CCCTCCTCGC GACCGACCGT GCGCGCCTTA CCGCCAGGCA GTCCGACGGC
AGCGTCAGGG TCGCGGTCGC TTCCGCCGAC CTGCCGGAGC TGGACCGCCA TTTCAGGAAG
TTCCTTTCCC CCTTCGACAT CGTCAAGATC AAGATCTACG CCGCCGACAG CACCATCGTC
TACTGCACCG AGCCAGGCCT CATCGGCAAG GTGGACAGCC GCAACTCGCG GCTGGACCAC
GCCCTGGAGG GGCTCTTCGA TTCCAAGCTG GAGAGAAAGG AAGAGGTGAA GGACCTGGCG
TCCGAGATGA AGTTCCACGT GGACGTGGTG GAAACGTACA TCCCGATCTG GGATAACGGC
CAGGTGATCG GGAGCTTCGA GGTCTACATC GACGTCACCA AGTACAGAAA CGACATGGCT
AATACCGCGT CTTTGGCGCT GGGCGCCCTG GCCGTCATCC TGGTCGTGGT ATTCGGCATC
TCTTACTTCC TGGTTCGAAG GGGGACCCGG GAGATCAAGG AGATCCAGGA AGTGCTGAAA
AAGCAGACCA TGACCGATGC CCTCACCGGG ACCTTCAACA AGAGCCAGAT CGAGCTTTTG
GCGTGCAAGG AGTTCGCCCG CTGTGCCCGC AGAACCGAGA AGGGGCTCGC GGGCGCGGAT
CTCGGCTTCA TCATGATCGA CATCGACCGG TTCAAGGAAG TAAACGACAA CCACGGCCAC
CTGGCGGGGG ATGTCCTGCT GCAGCAGTTC GCGGCGAGGA TCGCGCGCTC ACTGCGCAGC
TACGATTCGA TCGGGCGTTT CGGCGGCGAG GAGTTCCTGG TGATGCTCCC GGGTTCCGAC
CTGGAGCAGA CGCGCGTGGT CGCGCGGAAA ATCTGGTCCC TGCTCCGGGA TGAGCCTTAC
CTCGTCGACG GACGTGAGAT GAACCTGACC GCGAGCCTTG GCGCCGCCGC CGTCAAAGAA
GGGGACGCCG ACCTGCTCCA TGTCCTCAAG CGGGCGGACC AGAGGCTCTA CGCCGCCAAG
AGCGGGGGGC GCGACCGGGT GGTCTGA
|
|---|
| Protein sequence | MKQLRILPKS SSIRNPDSLL RLFVVIALVS TFIITIAAGL VFVEVLHHHV IRNAEEDAIK
VSSALLATDR ARLTARQSDG SVRVAVASAD LPELDRHFRK FLSPFDIVKI KIYAADSTIV
YCTEPGLIGK VDSRNSRLDH ALEGLFDSKL ERKEEVKDLA SEMKFHVDVV ETYIPIWDNG
QVIGSFEVYI DVTKYRNDMA NTASLALGAL AVILVVVFGI SYFLVRRGTR EIKEIQEVLK
KQTMTDALTG TFNKSQIELL ACKEFARCAR RTEKGLAGAD LGFIMIDIDR FKEVNDNHGH
LAGDVLLQQF AARIARSLRS YDSIGRFGGE EFLVMLPGSD LEQTRVVARK IWSLLRDEPY
LVDGREMNLT ASLGAAAVKE GDADLLHVLK RADQRLYAAK SGGRDRVV
|
|---|
| |