Gene GM21_0190 details

Gene Information

• Locus tag: GM21_0190
• ID: 8135493
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sp. M21
• Kingdom: Bacteria
• Replicon accession: NC_012918
• Strand: +
• Start bp: 226378
• End bp: 227112
• Gene Length: 735 bp
• Protein Length: 244 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 644867809
• Product: pentapeptide repeat protein
• Protein accession: YP_003020033
• Protein GI: 253698844
• COG category: [S] Function unknown
• COG ID: [COG1357] Uncharacterized low-complexity proteins

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 0
• Fosmid unclonability p-value: 3.37345e-35
• Fosmid Hitchhiker: No
• Fosmid clonability: unclonable

Sequence

Gene sequence

ATGAATCGCC GTCTTTTATC ACATACGGCT TATATTTCCC TCGCCGGCTG GCTTGTTGCC 
GCGGCTGTCC CGGCCGGCGA CGCCCACGCG GCAGCACCGA CAGCCCCAGC ATCCCCCGCA 
GCTCCGGCAA AGACCGGCGC CGCTACCGCT GCGACCGACG CAGCGGCCAA AGATGCCGCC 
AGTGCCGACG CGCGCGCGCT CAATGAGGCC AAGGCTAAGC TGGCGGCGCT GGCCAAGGAG 
GGGGCCAGTG AAGGGCCCTC GGCGGCCGCT GACAAGAAGG TTCAGGTGAA GAAAAAGGCG 
CTGGCTAAAA AGCAGAAAAA GGGAGCGGCC AAGGCGGGCT CGAAGGCAAA AAGGAAGGTG 
AAGCAAGGGG CGAAAGGGGC CGAGGTCAAG GTGAAGGTCC TGAACCGGCA CATGACGCAG 
GCCGAGCTTC AGGGGGTCCT CAGCACCACG CGCGACTTCT CCGGCACCGA CCTGAGCGGG 
GTAAACCTGG TGGGGTACGA CCTGACCGGG GCCAATTTCA GCAGGGCCAA CCTCCATGCC 
GCCAACCTGG AGCGGGCCAA GCTGGATGAG GCGGACTTGG AACTGGCGGA CCTGACCGGC 
GCCAACCTGC GCGGCGCCTC CCTGAATCAG GCCCGCCTGC GGGGAACGAG GCTGGCGGGG 
GCAAAGCTTG AGGGGGCGCT TTGGACCGAC AAGACGGTCT GCCGGAAAGG TTCGCTCGGG 
AGCTGTATAG AGTAG 

 

Protein sequence

MNRRLLSHTA YISLAGWLVA AAVPAGDAHA AAPTAPASPA APAKTGAATA ATDAAAKDAA 
SADARALNEA KAKLAALAKE GASEGPSAAA DKKVQVKKKA LAKKQKKGAA KAGSKAKRKV 
KQGAKGAEVK VKVLNRHMTQ AELQGVLSTT RDFSGTDLSG VNLVGYDLTG ANFSRANLHA 
ANLERAKLDE ADLELADLTG ANLRGASLNQ ARLRGTRLAG AKLEGALWTD KTVCRKGSLG 
SCIE