| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_0174 |
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| Symbol | |
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| ID | 8135477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | + |
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| Start bp | 209465 |
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| End bp | 210535 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644867793 |
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| Product | twitching motility protein |
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| Protein accession | YP_003020017 |
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| Protein GI | 253698828 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.0000000000536243 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGATTCCA AGATCTTCGT CCAAATACTT GAAATAGCCT TCAGCAAGAA GGTATCCGAC
GTGCATTTCG AAGTGGACAA TCCCCCGTTC TTCCGCGGCA AGGGACAGAT CATCCGCTCC
AAGCTCCCCA GCCTCACCTC CGAGGACACC GAATTCATCG CCTCGCAGAT CATGGCACAC
CACAACCGCC GCTGGGAGGT CGATCAAAAG GAGTTCGACA CCTCCTTCTC GCTGCCGAGC
GGCGCGCGCT TCCGCGTCAG CATCTTCAAG CAGCGCGGAC ACTTCGGCAT CATCATGAGG
GTGATTCCCG CCAACATCGG CACCTTTGAG GAACTCCGCC TGCCTCCTGT GCTTGGGGAG
GTCGCCAAGG CACCCAACGG CCTGATCCTG GTCACCGGTC CGACCGGCAA CGGCAAGTCG
ACCACCCTCG CCTCGATACT GCGCTACATC AACGAAAACC TCGCCTACAA CTGCATCACC
ATCGAGGACC CGATCGAATT CCTGTTCAAG TCCGAGAAGA GCTGCATCAT CCAGCGCGAG
GTGGGGATCG ATACCGACAG CTTCAGTTCC GCGGTAAAGG CCGCTTTGCG CATGGACCCG
GACCTGATCA TGGTGGGCGA GATGCGCGAC ACCGCCACTA TCGAATCCTG CCTGATGGCG
GCCGAGACCG GACACCTGGT TCTCTCCACC CTGCACACCC AGGGTGCGGT ATCGACCATC
AACAGGATCG TCGGGCACTT CCCTCCCGAC GCCCAGGAGA TCGTGCGCCA AAGGCTTGCG
GACATCCTGG TCGCCACCGT CTCGATACGC CTGGTAATGA ACAAGAGCGG AGAGGCGATC
CTTCCGGTCC TCGAGATCAT GCGTGCCACC ACAACCATCC AGAGCTGCAT CAGGGAGGGG
AGGCTGGACG AGATCGAGGC GCACATGGAG AACGGCCGCA GCCAATACCA GATGCAGACC
TTCGATCAGC ACCTGATCCA GTTGCACGAG CAGGAGCAGA TCACCATGGA GGACGCAAAG
AGACTCTCCC ATTCCATGGA CCTGGAGCGC AAGCTGATGT TCACCAACTA G
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| Protein sequence | MDSKIFVQIL EIAFSKKVSD VHFEVDNPPF FRGKGQIIRS KLPSLTSEDT EFIASQIMAH
HNRRWEVDQK EFDTSFSLPS GARFRVSIFK QRGHFGIIMR VIPANIGTFE ELRLPPVLGE
VAKAPNGLIL VTGPTGNGKS TTLASILRYI NENLAYNCIT IEDPIEFLFK SEKSCIIQRE
VGIDTDSFSS AVKAALRMDP DLIMVGEMRD TATIESCLMA AETGHLVLST LHTQGAVSTI
NRIVGHFPPD AQEIVRQRLA DILVATVSIR LVMNKSGEAI LPVLEIMRAT TTIQSCIREG
RLDEIEAHME NGRSQYQMQT FDQHLIQLHE QEQITMEDAK RLSHSMDLER KLMFTN
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