Gene GM21_0049 details

Gene Information

• Locus tag: GM21_0049
• Symbol: tdh
• ID: 8135348
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sp. M21
• Kingdom: Bacteria
• Replicon accession: NC_012918
• Strand: -
• Start bp: 60331
• End bp: 61374
• Gene Length: 1044 bp
• Protein Length: 347 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 644867666
• Product: L-threonine 3-dehydrogenase
• Protein accession: YP_003019894
• Protein GI: 253698705
• COG category: [E] Amino acid transport and metabolism; [R] General function prediction only
• COG ID: [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases
• TIGRFAM ID: [TIGR00692] L-threonine 3-dehydrogenase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 38
• Fosmid unclonability p-value: 0.000000160501
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGCCGAAGA CCATGCAGGC GCTGGTTAAG AAATACCCGA AGCCCGGGCT GTGGCTCGAC 
GAAGTCCCCG TCCCGGAGGT TGGGATCAAC GACGTGCTGA TCAAGGTCCA CAAGACCGCG 
GTCTGCGGCA CCGATCTGCA CATCTGGGAC TGGAACGACT GGGCCCGTAA AACCATTCCG 
GTCCCCATGG TGGTGGGCCA CGAGTTCGTG GGACGGGTGG CCGCCATGGG AAGCAACGTC 
GCCGACCTGA ACATCGGGGA CATCGTCTCC GGCGAGGGGC ACATCGTCTG CGGCAGGTGC 
CGCAACTGCC TGGCCGGCAG GCGCCACCTC TGCAAGGACA CCAACGGGGT GGGGGTCAAC 
CGCGCCGGCG CTTTCGCCGA GTACATCTGC ATCCCGGTCA CCAACGTCTG GCACGCCGAC 
CCCACCATCC CCATGGAAAT CCTGGGGATC TTCGATCCCT TCGGCAACGC GACCCACACC 
ACCCTCGCCT TCCCCATCCT GGGGGAGGAC GTACTCATCA CCGGCGCCGG CCCGATCGGC 
ATCATGGCGA CGGCCATAGC CCGCCACGCC GGGGCGCGCT ACATCGTGGT GACCGACCTG 
AACCAGTACC GGCTCGACCT GGCGAAGAAG ATGGGGGCGA CGGTGGCCTT GAACGTCAGG 
GAGGGGACCC TGGCACAGGT GCGGCAGCAG CTGGGGATGA AGGAGGGGTT CGACGTGGGG 
CTGGAGATGT CGGGAAACGG CGACGCCTTC AAGGAGATGC TGTCCAACAT GTGCCACGGC 
GGCAAGATCG CCATGCTGGG GCTCCCTTCT GCGGATATCT CCATCGACTG GAACCAGGTG 
ATCTTCAACA TGCTGACCAT CAAGGGGATC TACGGCCGGG AGATGTACGA GACCTGGTAC 
CTGATGCAGT CCCTGATCAA GATCGGGCTG GATCTCTCGC CGGTCATCAC GCACCGGATG 
CACTACACGC AGTTCGAGGA GGCGTTCCGG GTGATGAGCA CCGGCAACGC GGGGAAGGTG 
ATGCTCAACT GGGTCGAGGA GTGA 

 

Protein sequence

MPKTMQALVK KYPKPGLWLD EVPVPEVGIN DVLIKVHKTA VCGTDLHIWD WNDWARKTIP 
VPMVVGHEFV GRVAAMGSNV ADLNIGDIVS GEGHIVCGRC RNCLAGRRHL CKDTNGVGVN 
RAGAFAEYIC IPVTNVWHAD PTIPMEILGI FDPFGNATHT TLAFPILGED VLITGAGPIG 
IMATAIARHA GARYIVVTDL NQYRLDLAKK MGATVALNVR EGTLAQVRQQ LGMKEGFDVG 
LEMSGNGDAF KEMLSNMCHG GKIAMLGLPS ADISIDWNQV IFNMLTIKGI YGREMYETWY 
LMQSLIKIGL DLSPVITHRM HYTQFEEAFR VMSTGNAGKV MLNWVEE