Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_7299 |
Symbol | |
ID | 5675600 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 8919629 |
End bp | 8920420 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641246136 |
Product | NERD domain-containing protein |
Protein accession | YP_001511524 |
Protein GI | 158319016 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0313277 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGAAT ACCTGCGCCG AAGACAGTTG TACGCCGCCG AACGCGGCGA CAGATCACGA CGGGTGATGA TCACTGCGGC GGCGGGCGCC ATCGGTGCCG CCGTGCTCGT GGGGCTCGTG TGCGGTGCCG CCGGGCTCGC GGGCGGGACG GTCGCGCAGG TCGCGGTGCT CACCGGGCTG GCCGTGCTCG GTGTCCTGGC AGCCCGGCAC TACCGCGTGC CGCCGGAGAT CGAGGCCTGG CGGGTGGACG CGGAGGCCGA GCGCCGTACC GCCCGCTCGC TGGACCGCCT CACCCGCGCG GGCTACACCG TCCTGCACGA CCGCCAGCTC GCCGACTCGG CGGGCAACAT CGACCACCTG GTCATCGGGC CGTCAGGTGC CTGGGTGGTG GAGACCGACG CCCACCGCGG GCCGATCCGG CAGAACGCGG CCGGGGTGTG GGCGGGCAAG GTGCCGCTGC GCGCCATGCT CGGCCTGGTC GCCTGGATGG GCGAGGAGGC CACCGGCCAA CTCGTCGCCG AGCTCCCCTC CGGATGGCAG CTCGAGGCAC AGTCGGTCGT CGCCTTCGCC CGTACCGAGG TGCCGAACGG CCTGGCCCTG GTCGACGGCG TGCTGCTGCT GCCGATGGCC GGAGTCGCCG ACTACATCCT CTCGGCCGGG GTGGTGCTGC GCCCGATCGA TGTGGCGATG CTGGTCGACG TCGCCGAGCG GGTGTTCCCT CGCTACGAGG TCGCCGGGCC GCCCCCGTCG TGGCCGACCC GCTCGCGGCT GCGCGGCCTG CTGCGCCGGT AA
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Protein sequence | MAEYLRRRQL YAAERGDRSR RVMITAAAGA IGAAVLVGLV CGAAGLAGGT VAQVAVLTGL AVLGVLAARH YRVPPEIEAW RVDAEAERRT ARSLDRLTRA GYTVLHDRQL ADSAGNIDHL VIGPSGAWVV ETDAHRGPIR QNAAGVWAGK VPLRAMLGLV AWMGEEATGQ LVAELPSGWQ LEAQSVVAFA RTEVPNGLAL VDGVLLLPMA GVADYILSAG VVLRPIDVAM LVDVAERVFP RYEVAGPPPS WPTRSRLRGL LRR
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