Gene Franean1_7299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_7299 
Symbol 
ID5675600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8919629 
End bp8920420 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content74% 
IMG OID641246136 
ProductNERD domain-containing protein 
Protein accessionYP_001511524 
Protein GI158319016 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0313277 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAAT ACCTGCGCCG AAGACAGTTG TACGCCGCCG AACGCGGCGA CAGATCACGA 
CGGGTGATGA TCACTGCGGC GGCGGGCGCC ATCGGTGCCG CCGTGCTCGT GGGGCTCGTG
TGCGGTGCCG CCGGGCTCGC GGGCGGGACG GTCGCGCAGG TCGCGGTGCT CACCGGGCTG
GCCGTGCTCG GTGTCCTGGC AGCCCGGCAC TACCGCGTGC CGCCGGAGAT CGAGGCCTGG
CGGGTGGACG CGGAGGCCGA GCGCCGTACC GCCCGCTCGC TGGACCGCCT CACCCGCGCG
GGCTACACCG TCCTGCACGA CCGCCAGCTC GCCGACTCGG CGGGCAACAT CGACCACCTG
GTCATCGGGC CGTCAGGTGC CTGGGTGGTG GAGACCGACG CCCACCGCGG GCCGATCCGG
CAGAACGCGG CCGGGGTGTG GGCGGGCAAG GTGCCGCTGC GCGCCATGCT CGGCCTGGTC
GCCTGGATGG GCGAGGAGGC CACCGGCCAA CTCGTCGCCG AGCTCCCCTC CGGATGGCAG
CTCGAGGCAC AGTCGGTCGT CGCCTTCGCC CGTACCGAGG TGCCGAACGG CCTGGCCCTG
GTCGACGGCG TGCTGCTGCT GCCGATGGCC GGAGTCGCCG ACTACATCCT CTCGGCCGGG
GTGGTGCTGC GCCCGATCGA TGTGGCGATG CTGGTCGACG TCGCCGAGCG GGTGTTCCCT
CGCTACGAGG TCGCCGGGCC GCCCCCGTCG TGGCCGACCC GCTCGCGGCT GCGCGGCCTG
CTGCGCCGGT AA
 
Protein sequence
MAEYLRRRQL YAAERGDRSR RVMITAAAGA IGAAVLVGLV CGAAGLAGGT VAQVAVLTGL 
AVLGVLAARH YRVPPEIEAW RVDAEAERRT ARSLDRLTRA GYTVLHDRQL ADSAGNIDHL
VIGPSGAWVV ETDAHRGPIR QNAAGVWAGK VPLRAMLGLV AWMGEEATGQ LVAELPSGWQ
LEAQSVVAFA RTEVPNGLAL VDGVLLLPMA GVADYILSAG VVLRPIDVAM LVDVAERVFP
RYEVAGPPPS WPTRSRLRGL LRR