| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_7285 |
|---|
| Symbol | |
|---|
| ID | 5675586 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 8897605 |
|---|
| End bp | 8897952 |
|---|
| Gene Length | 348 bp |
|---|
| Protein Length | 115 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641246122 |
|---|
| Product | anti-sigma-factor antagonist |
|---|
| Protein accession | YP_001511510 |
|---|
| Protein GI | 158319002 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.352255 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGGTCG ACGCGACAGC CACGCGGATG ACGGTGCGGC GGACCGGGGA CGACGTCGTG
ATCGAGCTCG GGGGTGAGTT CGACATGGTC GGCAGGCTAC GTTTCCGCGA GCAGGTCGGC
GAGCTGCTGG GCCGGGGCGG CGGAGTGGTG ACGGTGGATG TGGCCGAACT TCGGGCGATC
GACATCGCGG GTCTCGCCGC CCTGCTCCGG GCGGATCTCC TGCTTCGTCG CGTCCACGCC
GAGCTGCGTA TTCGCGCGGC CGCGCCGGCG TTCGCCGAGC TCGTCCGCGA GACCGGGCTC
GCCGGCCGGC TTCGCGTCGA GGAGGCCGGC CGCCGCCGCG GCCACTGA
|
|---|
| Protein sequence | MRVDATATRM TVRRTGDDVV IELGGEFDMV GRLRFREQVG ELLGRGGGVV TVDVAELRAI
DIAGLAALLR ADLLLRRVHA ELRIRAAAPA FAELVRETGL AGRLRVEEAG RRRGH
|
|---|
| |