Gene Franean1_7217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_7217 
Symbol 
ID5675518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8814527 
End bp8815147 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content71% 
IMG OID641246054 
Producthypothetical protein 
Protein accessionYP_001511442 
Protein GI158318934 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4101] Predicted mannose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.862471 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGACC TGCACGTTCC GTCCATTGAC GATCTTGTCC CGTCCCCCGA GGAGATCGAC 
GCCTTTCATC GGCGGCTGCA TCACATCGCG CCCTGGGCGC TCGATCCCGA GACGGCGCAG
ACATCCGGGA TGCGGCGGCT GGCGGCGGTG AGCGCGCGCA CCGTGGGCTC GTCGAAGCTG
TGGATGGGCC AGACGCACGT GGCGCCGGCT ACCGCGTCGG CCAATCATCA CCATGGTCGG
TCCGAGACCG CGATCTACGT GGTCAGCGGG CATCCGGAGT TCGTCTTCCC GGCGGACGAG
CTCTCGGGGG ACGACACCGG CGCCGCGAGC CGCGGCGGCG GCGCGAGCGG CGCGGACGGC
GGGAACGGCA GGAGCGGCGA GAACGGTGGC GGGAGCGATT CGGGCGCTCC GCCGCGGGAG
ATCCGTATCC GGACCTCGCC GGGGGACTAC ATCTTCGTTC CGCCGTGGGT GCCGCACCGC
GAGGAGAACC CGGATCCCGA GCACGAGGCC CTGGTGGTGA TCGCCCGCAG CACCCAGGAC
GCGATCGTCG TCAACCTGCC GGACCTGCGC TGGACCGGCT CCGTCCGAAC GACCAGCGAG
GACATCGCGG GTTGCTCGTA A
 
Protein sequence
MSDLHVPSID DLVPSPEEID AFHRRLHHIA PWALDPETAQ TSGMRRLAAV SARTVGSSKL 
WMGQTHVAPA TASANHHHGR SETAIYVVSG HPEFVFPADE LSGDDTGAAS RGGGASGADG
GNGRSGENGG GSDSGAPPRE IRIRTSPGDY IFVPPWVPHR EENPDPEHEA LVVIARSTQD
AIVVNLPDLR WTGSVRTTSE DIAGCS