Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_7217 |
Symbol | |
ID | 5675518 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 8814527 |
End bp | 8815147 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641246054 |
Product | hypothetical protein |
Protein accession | YP_001511442 |
Protein GI | 158318934 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4101] Predicted mannose-6-phosphate isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.862471 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTGACC TGCACGTTCC GTCCATTGAC GATCTTGTCC CGTCCCCCGA GGAGATCGAC GCCTTTCATC GGCGGCTGCA TCACATCGCG CCCTGGGCGC TCGATCCCGA GACGGCGCAG ACATCCGGGA TGCGGCGGCT GGCGGCGGTG AGCGCGCGCA CCGTGGGCTC GTCGAAGCTG TGGATGGGCC AGACGCACGT GGCGCCGGCT ACCGCGTCGG CCAATCATCA CCATGGTCGG TCCGAGACCG CGATCTACGT GGTCAGCGGG CATCCGGAGT TCGTCTTCCC GGCGGACGAG CTCTCGGGGG ACGACACCGG CGCCGCGAGC CGCGGCGGCG GCGCGAGCGG CGCGGACGGC GGGAACGGCA GGAGCGGCGA GAACGGTGGC GGGAGCGATT CGGGCGCTCC GCCGCGGGAG ATCCGTATCC GGACCTCGCC GGGGGACTAC ATCTTCGTTC CGCCGTGGGT GCCGCACCGC GAGGAGAACC CGGATCCCGA GCACGAGGCC CTGGTGGTGA TCGCCCGCAG CACCCAGGAC GCGATCGTCG TCAACCTGCC GGACCTGCGC TGGACCGGCT CCGTCCGAAC GACCAGCGAG GACATCGCGG GTTGCTCGTA A
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Protein sequence | MSDLHVPSID DLVPSPEEID AFHRRLHHIA PWALDPETAQ TSGMRRLAAV SARTVGSSKL WMGQTHVAPA TASANHHHGR SETAIYVVSG HPEFVFPADE LSGDDTGAAS RGGGASGADG GNGRSGENGG GSDSGAPPRE IRIRTSPGDY IFVPPWVPHR EENPDPEHEA LVVIARSTQD AIVVNLPDLR WTGSVRTTSE DIAGCS
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