Gene Franean1_7215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_7215 
Symbol 
ID5675516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8812097 
End bp8812735 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content72% 
IMG OID641246052 
Productflavin reductase domain-containing protein 
Protein accessionYP_001511440 
Protein GI158318932 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTCG ACACCCTCGG CCGCGACCCC TCGCCGCACC CAGACCAGCC ACGGACGGCT 
CCAGCACCGG AACAGGCGTC CCCGTTGTCC CAGGTGCCCG CAGTCTCGGT GGCTCCCGCA
CCGGTTCCGG TGTCGGCGGC GCCACAGCCG GGGGCGGCGG TCGACCCGGC GGCGCTGCGC
AGTGCGTTCC GCCGGCACGC GGCCGGGGTC ACCGTCGTGA CGATGATCGG TCCCCGGGGT
CCGGTCGGCT TCACCGCGAC GTCGGTCGCC TCCCTCTCCG CGGATCCGCC GCTGCTGTCG
CTGTCCCTGT CCGCGACGTC GTCGAGCGCG CCGGCGCTGC TCGCCGCCGG AACCCTTGTC
GTCCACCTGC TCTCGGACGG CCAGCAGGAG ATCGCCGCGC GGTTTGCGAC CTCGGGCATC
GACCGGTTCG CGGAACCGAC CCGCTGGCGC CGCCTGCCCA CCGGCGAGCC ACTGCTGGTG
GACGCGGCCG TGTGGCTACG GACCCGCATC CACTCCCGGC TGAACGCCGG CGACCATCAC
CTGGTGATCG CCGAAGTCCT GGAAACCCGC TCCCACCGCC ACTCCCAGCC CCTCATCTAC
CACAACGGCA CCTACGGCAC CATTAATCTC AACAAATAG
 
Protein sequence
MTLDTLGRDP SPHPDQPRTA PAPEQASPLS QVPAVSVAPA PVPVSAAPQP GAAVDPAALR 
SAFRRHAAGV TVVTMIGPRG PVGFTATSVA SLSADPPLLS LSLSATSSSA PALLAAGTLV
VHLLSDGQQE IAARFATSGI DRFAEPTRWR RLPTGEPLLV DAAVWLRTRI HSRLNAGDHH
LVIAEVLETR SHRHSQPLIY HNGTYGTINL NK