| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_7139 |
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| Symbol | |
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| ID | 5675442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 8719908 |
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| End bp | 8721251 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 641245978 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase |
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| Protein accession | YP_001511366 |
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| Protein GI | 158318858 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCCGC TCAGCCTCGG CGAGATCGCC GCGGTCGTCG GCGGGACGGT CGCGGGCGAC
GGCGCCGTGA CGGTGACCGC GCCAGCCGTG CTCGACGGCC GGCAGGCCGA GCCGGGCGGC
CTGTTCGTCG CCTTCGCCGG CGAGCACGTC GACGGCCACG ACTACGCCGG CCAGGCCGGC
CGGGCCGGCG CGGTGGCCAC GCTCGGCTCC CGGCCCACGC CGCTGCCCAC CGTCGTCGTC
GAGGACGCCC AGTCCGCGCT GCAGGCGCTC GCCGCCCACG TCGTGGCCCG GCTGCGCGAC
GGGCTGACCG TTGTCGGGCT GACCGGCTCC CAGGGTAAGA CCAGCACCAA GGACCTGCTG
GCGGCCGTGC TGTCGAGCGC CGCGCCGACG ATCGCCACGA TCGGCTCGCT CAACAACGAG
CTCGGTGTGC CGCTCACCAT GCTGCGCGCC GACCCGGCCA CCCGGTTCCT CGCCCTGGAG
ATGGGCGCCC GCCACATCGG CGACATCGCC GAGCTCACCG GCCTGGTCGC ACCCGACATC
GCCGTCGTCC TCAACGTCGG CCAGGCCCAC CTCGGCGAGT TCGGGTCGCG CGAGGCCATC
GCCAGGACCA AGGGCGAGCT GGTGCAGGGG CTGGCGCCCG GCGGCACCGC CGTCCTGGGC
GCCGACGATC CCCGGGTGGT CGCGATGCGC TCGCTCACCG ACGGTCCGGT GCTGACCTTC
GGCCGGGTCG AGCACGCCGA CGTGCGCGTG CTCGACCTGG CGCTGGACCG GCTCGGCCGG
CCGTCCTTCA CGCTGCGGAC CGCCGACGCC TCGGCTCCCG TCACGCTGCC GCTCGTCGGC
GGCCACCAGG CACTCAACGC CTCGGCTGCC GCGGCGGCGG GGCTGGCGGC CGGCGTACCC
CTCGACGTGG CAGCGGCGGC GCTGGCCACC GCCTCGCTGT CGCAGTGGCG CATGGAGCTA
CGCGATCTCG CCTGCGGCGC GACGCTGCTC AACGACTCGT ACAACGCCAA CCCCGACTCG
ACCCGCGCCG CCCTGGACGC GCTGGCAGCG ATCGAGGGAG GGCGCCGCAT CGCCGTTCTC
GGCGAGATGC GCGAGCTCGG CGACGGCAGC GAGGCCGAGC ACCGCGCCGT CGGGGAGTAC
GCCGCCTCCC GGGCCGACGT GGTGGTCGCG GTCGGCGAGG CCGCCCGACC GATCGCCGAC
GGCGCGGGAG AACGGGTGGT GGCGCTGGCT GACAACAACG CGGCCGTTGA CTGGCTACGC
GGCCACCTCG CCGCCGGCGA GGTGGTGCTC GTCAAGGCCT CCCGCGGGGC GCGCCTCGAC
GAGGTAGCCG TCGCACTCGC GTAG
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| Protein sequence | MIPLSLGEIA AVVGGTVAGD GAVTVTAPAV LDGRQAEPGG LFVAFAGEHV DGHDYAGQAG
RAGAVATLGS RPTPLPTVVV EDAQSALQAL AAHVVARLRD GLTVVGLTGS QGKTSTKDLL
AAVLSSAAPT IATIGSLNNE LGVPLTMLRA DPATRFLALE MGARHIGDIA ELTGLVAPDI
AVVLNVGQAH LGEFGSREAI ARTKGELVQG LAPGGTAVLG ADDPRVVAMR SLTDGPVLTF
GRVEHADVRV LDLALDRLGR PSFTLRTADA SAPVTLPLVG GHQALNASAA AAAGLAAGVP
LDVAAAALAT ASLSQWRMEL RDLACGATLL NDSYNANPDS TRAALDALAA IEGGRRIAVL
GEMRELGDGS EAEHRAVGEY AASRADVVVA VGEAARPIAD GAGERVVALA DNNAAVDWLR
GHLAAGEVVL VKASRGARLD EVAVALA
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