Gene Franean1_7114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_7114 
Symbol 
ID5675798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8684050 
End bp8684352 
Gene Length303 bp 
Protein Length100 aa 
Translation table11 
GC content72% 
IMG OID641245951 
Producttransposase, IS4 family protein 
Protein accessionYP_001511342 
Protein GI158318834 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0985556 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTGCCGG CGCGGCTGGT CGTGTACTTC ACGCTAGCGA TGTGCCTGTT CTTCGACGAC 
GACTACGAAG AAGTGCTGCG CCGGCTGGTG TCGTCGACGC TGTGGCGGGG GAACCGGGAC
GCGGGGTGGC AGGTCGCGAC GTCGGGGGCG GCCTCGCAGG CGCGGCGACC GCTGGGTCCC
GAGCCATTGG CGGAGCTGTT CCGGTCGGTG GCGCGTCCGC TGGCTGTGGC GGCGACGCGG
GGGGCGTGGC TGGAGGGACG GCGGCTGACG GCGGTGGACG GGTTCTCACC ATCAGCAGGG
TGA
 
Protein sequence
MLPARLVVYF TLAMCLFFDD DYEEVLRRLV SSTLWRGNRD AGWQVATSGA ASQARRPLGP 
EPLAELFRSV ARPLAVAATR GAWLEGRRLT AVDGFSPSAG