Gene Franean1_6995 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6995 
Symbol 
ID5675306 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8521318 
End bp8523081 
Gene Length1764 bp 
Protein Length587 aa 
Translation table11 
GC content73% 
IMG OID641245841 
Producthypothetical protein 
Protein accessionYP_001511232 
Protein GI158318724 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.511073 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.817264 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCCGCG GCGGACAGTG GCGAATTCGA CAATGCCGTG CTGCGGCTGG ATCTCGCGGT 
GCGCAAGCGC GCCAGCCGGC TCGGCGAGGA GCCGGTTGTT CCCATGACGC CACCGGTCCG
GGAACGGGTG AACAGAATGA TTCATGTTCT CACCGAGGTG TCGGGCCGCG ACACGTCGGC
AGTGGGAGGC CGCGACGCCG TCGGCCCCGG GAACCGTCGG CGCCCCGGGT CGTCGGAGAC
CCCGGCCCCG GCCGACACCG GCCACTGAGG GTGGCGGGCC GCTCGGGGTC GGTCCCACCG
GCCGGCCGGA CCGCGGGTGC CGGGCCTGAA CCAGCGGCGC ACGAGCTCTG GGGGGCCGAA
CTCGTCGTCC ACCTGTTTGC TCCGGTGGAT GGGCCCGAAG CGGCGGACGC GTACGGGTTT
CTCCGGGACA TCTGGTCGGC GTGCCGCCGC ACTCTGAAGA TGGGATCGGC TCTCGACCGG
TTGGGAGTGC CCGCCGACCT GCCGGGTTCG GTCGGCGACC TGCCTTCCCG AGGTCTGCTC
GCCGCCCAGC TCAACCTGGG CGACGGGACG CACCAGGCGC TGTTCCGGCG GGACCATGAC
CTGCTCTGTC TGTCCGTGAT GCTCGCCCCG GCGGTGGACG ACGGTGCCCT CGACTGGTCC
GCGCCGGAGG ACCAGTGGAG CGGCGTGGCG GATGAGCTGC CCGCCTCGCT GGTCGGCGCC
GTACGTCTTT ACCAGGGGCA TCTCGGCCGC TCGGAGGCGG GTCCGCGGGC GGTGGTGGCC
GCGGCTCCCG AGCTCGCCCG CACCTGCGCC AACGCCTGGT CCGGGTGGCA CCAGGCGCCC
GGATGGGAGG AACGCGGTGC CACCACCGGC CTGGGGTTCG CGGTGTGGGA GCCGGCCGCT
CCGGCGGACG ACCAGATCGA GCGGAGGCTG CTTATCCTGG TTCCGGGCTC ACGGGACGGA
GAACTGGTCG CCTGGACGTG GAACCGCCGG GACGCCGCCG CGCCCGCTTT CCAACGCTAT
CTGGCCGGGG CGGCGAAGGT CCGCTACCAG TGGCGCGTTC GGGACGGCGG GGACGCGGTC
CACGGCCTGC GCGACCGGCT CGACGAACGG GGAGCGCGGC TGCGGGAGTT CCTGCGCGAC
CCGGTCCCGT TCCCGGACCG CGTCGCCGCC TGTGTGCACC AGCTCCACGC CGACCAGGTG
GACCTGACGA CCGTCACCAC GAGGATGACG GAGATGCGGC GCAGCGTGGA GATCTCCGGG
GTCAACATGG CGGCGATCCT GGCGGCCGAT GGGACCGTGC CTCGCGACGG CGACCCGTTC
GCCACTGACC GGCGGCTGGT GGAGCACGTG GTCGGCCAGC TCGACGACGA CCTGGTCTTC
CTCGGCGCGG CGGACACGCG CGTCGAGGCG GTCCTGGCCC TCGCGGCCCG GTCGACCCAG
CACGTCCGGT CTGCCGAGCA CGTCCGGTCG GCACCGGACA TCCGGCTCGA TCCGGAGGAG
ATGACCCAAC TGCGCGCGGA GCTCGCGGCG GCCTTCGGCG CCGGGGTACG GGCGTCTCAA
CTGCTCGAGG AGATCGGCCT GCCCCGCGCG CGCCAGTTCG TCCAGGGCGG TGCGACTCCG
CTGGAATGGT GGACCGAGAT GCTCCGGGAG CTCGGCAACG GCGCGGTCGA CCGGCCGTAC
CGTAAAACGC TCGAGGCCGC GCTGCGGGAG TACGGCTACA ACGACGTTTT CGTCCGGCTG
GCCCGTCGGC ACGGGCTGCG CTGA
 
Protein sequence
MVRGGQWRIR QCRAAAGSRG AQARQPARRG AGCSHDATGP GTGEQNDSCS HRGVGPRHVG 
SGRPRRRRPR EPSAPRVVGD PGPGRHRPLR VAGRSGSVPP AGRTAGAGPE PAAHELWGAE
LVVHLFAPVD GPEAADAYGF LRDIWSACRR TLKMGSALDR LGVPADLPGS VGDLPSRGLL
AAQLNLGDGT HQALFRRDHD LLCLSVMLAP AVDDGALDWS APEDQWSGVA DELPASLVGA
VRLYQGHLGR SEAGPRAVVA AAPELARTCA NAWSGWHQAP GWEERGATTG LGFAVWEPAA
PADDQIERRL LILVPGSRDG ELVAWTWNRR DAAAPAFQRY LAGAAKVRYQ WRVRDGGDAV
HGLRDRLDER GARLREFLRD PVPFPDRVAA CVHQLHADQV DLTTVTTRMT EMRRSVEISG
VNMAAILAAD GTVPRDGDPF ATDRRLVEHV VGQLDDDLVF LGAADTRVEA VLALAARSTQ
HVRSAEHVRS APDIRLDPEE MTQLRAELAA AFGAGVRASQ LLEEIGLPRA RQFVQGGATP
LEWWTEMLRE LGNGAVDRPY RKTLEAALRE YGYNDVFVRL ARRHGLR