Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_6950 |
Symbol | mdoC |
ID | 5675263 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 8467701 |
End bp | 8469137 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641245799 |
Product | glucans biosynthesis protein |
Protein accession | YP_001511190 |
Protein GI | 158318682 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1835] Predicted acyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.91383 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.275978 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGGCAGC GGGAGGCAGT ACCCTCCGCG GGAGCATCCA CCGCGGGCGT GCGCTACCAC CACCTGGACG CGCTGCGCGG CGTCATCATG CTGATCGGCG TGTTCGTCCA CGTGGCCACG CTCGGGGACG ACCCCGTCTT CGACGGGATA GCGCGTGCCT CCGGCCTCTT CCGGATGGAG GCCTTCTTCG TCATCTCGGG TTTTCTCTCC GCGATGCTCA CCGCGAAATA CGGGCCCGGG CTCGCCCTCC GGCGCAGGCT GGCGGCGGTG GGCGTGCCGC TGGTGGCGAC GCTCGTGCTG TTCAACCCGC CGACACTGTG GCTGATCTCC CGCTTCCACA ACCGTAGCGA CATCTCGTTC GCCGACTTCC TGCGAGCCTG CATGGCTCCC GCGTTCGAAG GCCGGCTGAA CTGGTACCTG CACCTGTGGT TCCTGCTGGT GCTCCTCGGG TACGCGCTCC TCACCCCCGC GGCGGTGAAG CTGCTGAGCA GGTTCGTCTC CACCCGGTGC TATCAACAGG CCACCGCGGG GCGGCTCCGC GCCATGACGG CGATCACGCT TCTCGTGCTG GGCACGATGG CGGCCGGCAG GATCGGCTGG GGCGAGGCCA TCCGGCCCGT CATCGGGTCG GGATTTCATG CGGACCTGGT CCGCCGCACC CTGGAGTTCC TGCCGTTCTT CCTACTCGGT CTCCTGCTGT TTCTGGACAG GGGCCGGCTC GTGCCGTCAT TCCAGCGGCC CGCGCCGGTT CTTCTCGCGG TGTCGGGGCT CGTCCTGCTG GCATCGTGGC ACGGGTGGGT GGACATGCTC GCGATGGGCA CCGGCCGGGT GCTGGCCGAG ACGATGTTCG CCATTCCGGT GATCGCGACG ATTTTCGCCG CGGCCAGTCG GTGGGGGTCG CGCCCGAGTC CCGCCCTGCG TTATCTGGCG GACGCCTCGT ACTCGGTCTA CCTGCTGCAT TTCTTCTGGA TCTACGTGTT CGCGACCCTG CTCGGTTTCG ATCCAGGTCT CGGTTCGGCA CGGATGATGC TGCTGGTCGT CGCCACCTAC GCGGCCACCT TCGCGACCCA CCATCTCGTG ATTCTCCGGT TCCCGCTCCT CCGGCGAATC TTCAACGGCA GGTTCCCGTC GAAGGCCCGC CCCGGGTCGG AACCGCCCGC GGCCGTGCCG GCGGCTCCGT CCGTGGCGGT GCCGGCGGTT CCGCCGGTTC TCACCTCGAC GCGTGGCGGG TGCGCCGCTG GTCGGGCACG GCCGCGGGCC GGGAGCGCCT CAGAGGATCC GAGCCAGGCG GGCGCACCGG CCCAGCCGAC ACGGGCATCC CCGGCACCGC GCTGTACGTC CGGTGCCCGC CCGGCGCGGC ACCCGCGGCG GCGCCCGGCA CCGAGCCCAT CGGGGACGGT GAGCCCATCG GGGACGCCGA GTCCGCCGGG CGCGTAG
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Protein sequence | MGQREAVPSA GASTAGVRYH HLDALRGVIM LIGVFVHVAT LGDDPVFDGI ARASGLFRME AFFVISGFLS AMLTAKYGPG LALRRRLAAV GVPLVATLVL FNPPTLWLIS RFHNRSDISF ADFLRACMAP AFEGRLNWYL HLWFLLVLLG YALLTPAAVK LLSRFVSTRC YQQATAGRLR AMTAITLLVL GTMAAGRIGW GEAIRPVIGS GFHADLVRRT LEFLPFFLLG LLLFLDRGRL VPSFQRPAPV LLAVSGLVLL ASWHGWVDML AMGTGRVLAE TMFAIPVIAT IFAAASRWGS RPSPALRYLA DASYSVYLLH FFWIYVFATL LGFDPGLGSA RMMLLVVATY AATFATHHLV ILRFPLLRRI FNGRFPSKAR PGSEPPAAVP AAPSVAVPAV PPVLTSTRGG CAAGRARPRA GSASEDPSQA GAPAQPTRAS PAPRCTSGAR PARHPRRRPA PSPSGTVSPS GTPSPPGA
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