| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6940 |
|---|
| Symbol | |
|---|
| ID | 5675253 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 8455500 |
|---|
| End bp | 8457038 |
|---|
| Gene Length | 1539 bp |
|---|
| Protein Length | 512 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641245789 |
|---|
| Product | Acetyl-CoA hydrolase-like protein |
|---|
| Protein accession | YP_001511180 |
|---|
| Protein GI | 158318672 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0427] Acetyl-CoA hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.332624 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.415462 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCCGAAG CATCCACACC GACGACGATC TCGGTCATCT CAGCCCTCCC CACCGACCTC
CGGAGATCCG TATACAACAC GTTTTCCCCT TCACACCCAG CAGATCTGGC CTTTCCGTCC
CGCACCGGAC ATGACCAAGG ACTCGTGGCG GGGAACGGAC GTCCCTGGAC CGCCGCGGCC
GGCCGACCCG CCGGCCGGGC CGCTCGGGGC ACCCGGGACG ATGCGGACAT GCGGATCGTG
AGTGAGCCAG TGCTCGTGGA CCTGCTCGCC GCTCGGCTGG CGGACCGACC GGACCGGCCG
AACGGGCCGG AGCGGCCGGA CCGGCCGCCA CTGATCGTCG CGGCGGGCAA CTTCGCCACT
CCGACCGTCG CGGTGGGCGC GCTCGACCGC GCGCTGTCCG CGTACCGTCT CTTCGTCCTC
AACGCCCAGC ACGGCGTCCC CGAACGGCCC GGTGTAACGC CGGTGACGCC GTTCGTCGGC
CCCGGGATGC GGGAACACCG CGCGCTGGAG TACCTGCCCT GCCGGCTGAG CATGGTCCCC
CGGCTGTTCA CCGGCGCGCA CCGCCCCGAC GCCGTCATCC TGCACACCAG CCGGCCAGTT
GACGGGAAGG TGTCGATGGG CACCGAGGTC AACATCCTGC CGGCCGCCGT CGAAGCCGTC
CGGAGCTCCG GTGGTCTGGT CATCGCCCAG ACCAACTCCC GGATGCCCTA CACCTTCGGT
GACGGCGAGC TCTCCTGCGA CGAGGTGGAC CTCGCCCTGG AGGTCGACGT ACCGCTGGCC
AGCCCCGCTT TCAGGCAGAC GAGCGACATC CACCACGAGA TCGGCGCCCG GGTCGCCGCG
CTGGTGGCCG ACGGCGCGAC CCTGCAGCTC GGCATCGGCG CCGTCCCCGA CGCCACTCTC
GCGGCGCTCA CCGGGGGACG ACGCCTGCGG GTGTGGACGG AGACGTTCTC CGACGGCGTG
CTGGCACTCG ACCGCTCGGG TGCCCTGGCC GCGGACGCTG AGCTGGTCAC CAGCTTCGTG
TTCGGCTCAG GCGAGCTGTA CGCCTGGCTC GACCGCAACT CCCGGGTCCG GCTGCTGCGC
ACCGAGACCG TCAACGACCC CGGGACCATC GCCCGCCAGC CCGGGATGAC GTCGATCAAC
ACCGCGCTGC AGATCGACCT GCACGCCCAG GCCAACGCCT CGTTCGTACG CGGGCGCGTG
TGGTCGGGCT TCGGCGGGCA GCCCGACTTC GTCACCGGAG CACTGCACGC CACCGGCGGA
CGAGCGATCA TCGCCCTGCC CAGCTGGCAC AGCAAGACCG GCCGGTCGAC GGTCGTCCGG
GCGCTGGCCG AGCCGACCAC AAGTTTCCAG CACAGCCATG TCATCAGCGA GCACGGCACC
GCGCAGCTGT GGGGCAGAGG GCAGGAGCAG CAGGCCCGCG ACCTCATCGA GCACGTCGCG
CACCCGGCGG CTCGCCCCGG CCTGCGGGAA GCCGGGGCGG AAGGGCACAC GGACGGAAGG
GATGCCGGGC GGGCGGAAGG ATCGGAGCTG CCGGCCTGA
|
|---|
| Protein sequence | MAEASTPTTI SVISALPTDL RRSVYNTFSP SHPADLAFPS RTGHDQGLVA GNGRPWTAAA
GRPAGRAARG TRDDADMRIV SEPVLVDLLA ARLADRPDRP NGPERPDRPP LIVAAGNFAT
PTVAVGALDR ALSAYRLFVL NAQHGVPERP GVTPVTPFVG PGMREHRALE YLPCRLSMVP
RLFTGAHRPD AVILHTSRPV DGKVSMGTEV NILPAAVEAV RSSGGLVIAQ TNSRMPYTFG
DGELSCDEVD LALEVDVPLA SPAFRQTSDI HHEIGARVAA LVADGATLQL GIGAVPDATL
AALTGGRRLR VWTETFSDGV LALDRSGALA ADAELVTSFV FGSGELYAWL DRNSRVRLLR
TETVNDPGTI ARQPGMTSIN TALQIDLHAQ ANASFVRGRV WSGFGGQPDF VTGALHATGG
RAIIALPSWH SKTGRSTVVR ALAEPTTSFQ HSHVISEHGT AQLWGRGQEQ QARDLIEHVA
HPAARPGLRE AGAEGHTDGR DAGRAEGSEL PA
|
|---|
| |