| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6933 |
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| Symbol | |
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| ID | 5675246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 8446251 |
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| End bp | 8446985 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641245782 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001511173 |
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| Protein GI | 158318665 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.322421 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGGCT GGACGCGAGG GCCGCCGCCG CGCCCGTTGG TCCTGGCGGG CGTAAGCCGA
TTGGCGAGGC GACTCCGAGG CCGTATCGTC GCGCTCATGG AGAAGATCCG GGTGTTCGTT
CTCGATGACC ACGAGATCGT GCGTAATGGT CTGCGTCAGA CGCTCGCCCG GCATGACGAT
ATCGAGGTCG TCGGAGAGGC CGGGCTGGCC GCGGAGGCGT TGCGGCGGAT TCCCGCGCTG
CATCCGCATG TGGCGGTGCT GGACGGGCGG CTGCCTGATG GCAGTGGCAT CGACGTGTGC
CGGGAGGTGC GGTCGGCGTT GCCGGATGTG GCGTGCCTGA TTCTGACCTC CTATGACGAC
GACGAGGCGC TGTTCTCGGC GATCATGGCG GGTGCGGCGG GGTACGTGCT GAAGGAGATC
CGGGGCAACG ACCTGGTGGG GGCGATCCGG ACGGTGGCGT CGGGGCAGTC GCTGCTGGCG
CCGTCGGTGA CGCGGCGGGT GCTGGAGCGG CTGCGGGACG GGCCGAGCGA GGACCCGGCG
ATGGCGACGC TGAACCAGCG GGAGCGCGAG ATCCTGCAGC TGATCGCGGA CGGGTTGACG
AACCGGCAGA TCGGCACGCG GCTGGGCCTG TCGGAGAAGA CGGTGAAGAA CTACGTGTCG
AGCATTCTGG AGAAGCTCGG CCTGGCGAGC CGTACGCAGG CCGCCGTCTA CCTGATGAAG
CAGACCGGGG AGTAG
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| Protein sequence | MAGWTRGPPP RPLVLAGVSR LARRLRGRIV ALMEKIRVFV LDDHEIVRNG LRQTLARHDD
IEVVGEAGLA AEALRRIPAL HPHVAVLDGR LPDGSGIDVC REVRSALPDV ACLILTSYDD
DEALFSAIMA GAAGYVLKEI RGNDLVGAIR TVASGQSLLA PSVTRRVLER LRDGPSEDPA
MATLNQRERE ILQLIADGLT NRQIGTRLGL SEKTVKNYVS SILEKLGLAS RTQAAVYLMK
QTGE
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