| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6931 |
|---|
| Symbol | |
|---|
| ID | 5675244 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 8441355 |
|---|
| End bp | 8443790 |
|---|
| Gene Length | 2436 bp |
|---|
| Protein Length | 811 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641245780 |
|---|
| Product | putative phosphoketolase |
|---|
| Protein accession | YP_001511171 |
|---|
| Protein GI | 158318663 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3957] Phosphoketolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.281308 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCC CGGCCGTCCA CGACCAGGAA CAAGGCGACC AGGAACAAGG CGGCCTGGAG
CACGGGCTCG ACGAGGCCCA GCTGGACGGG CTGATCGCCT ACTGGAACGC GGCGAACTAC
CTGACCGCGG CGCAGATCTA CCTGATGGAC AACCCGCTGC TGCGCCGGCC GCTGCGCCGC
GACGACATCA AGCCGCGGCT GCTGGGCCAC TGGGGGACGT CCCCGGCGCT GAATCTGGTC
TACGCCCACC TGAACCGGCT GGTCCGCCGG ACCGGCCAGG ATGTGCTCTA CGTGGCCGGC
CCCGGGCACG GCGGGCCGGC GCTGGTCGCC AACACCTACC TGGAGGGCAC GTACTCGGAG
ATCTACCCGA GCGTGTCGCG GGACGTCGCC GGGCTGACCC AGCTCGTGCG GAGGTTCTCG
ACCCCCGGTG GTATCCCGAG CCATGTCAGC GTCCCGACGC CGGGGTCGAT CCACGAAGGC
GGCGAGCTCG GCTACGCGCT CGTCCACGCG TTCGGCGCCG TGTTCGACCA CCCCGATCTG
CTGGTCGCCG CCGTTGTCGG CGACGGCGAG GCCGAGACCG GCCCGCTGGA GGGCAGCTGG
AAGGGCGTCG ACTTCCTCAA CCCGTCCCGC GACGGCGCGG TGCTGCCGAT CCTCAACCTC
AACGAGTACA AGATTGCCAA CCCGACGGTG CTCGGCCGGC TCTCCCGGGA ACGGCTGAAC
CACCTGTTCG CCGGCCACGG GTACGACGTC CTGTGGGTGG AGGGGGACGA CGTCCGCGCG
GTGCACCGTG CGTTCAGCGC CGCGCTCACC ACAGCACACA GCCGCATCCG CGACATCCAG
CGGACGGCCC GACGTCCAGG TGCCACCGTC ACCGAGGCGC CGATCTGGCC GATGATCGTG
CTGCGGACCC CTAAGGGCTG GACCGGCCCG CACGAGGTGG ACGGCGTCCT TGTCGAGGGG
ACGTTCCGAG CGCACCAGGT GCCGCTGTCG GGGGTGCGGG ACAATCCCGA GCATCTCGCC
CAGCTCGAGG CCTGGCTGCG TTCCTACCAG CCCGAGCGGC TGTTCGACGC CGACGGCCGG
CTGGTCCCCG AGCTGGCGGC GCTCGCCCCG GACGGCCCGG CCCGGCTGGG CGCCACGAGC
TACGCCAACG GCGGCGTGCG CACCGAGCCG CTGCGGCTGC GCGACTGGCG GGCCCACGCC
CTCGACGTCG ACCCGGCCCG CCGCGGCAGC CTCGTCCACG AGACGACCCG GCCGCTGGGC
GAGCTGCTGG CCGACGTCTA CCGGGACAAT CCGACCACCT TCCGGGTCTT CAGCCCGGAC
GAGCTGGCCA GCAACCGCCT CGGGGCGATC CTGGACGTCA CCGACCGCTG CCTGGTCGCG
CCGATCGACC CGCGCGACGA CCGGGTCAGC CCGGCCGGCC GGGCGATGGA GGTCCTCTCC
GAGCACCTGT GCGAGGGCTG GCTGGAGGGC TACACCCTGA CCGGCCGGCA CGGCCTGTTC
GCCACCTACG AGGCGTTCGC GATGGTGTCG GCGTCGATGG TGATCCAGCA CACCAAGTGG
CTCCAGGAGG CGAGCCGGCT GGCGTGGCGC GCCCCCGTCC CGAGCCTGAA CGTCCTGCTG
ACCAGCACCT GCTGGCGCAA CGACCACAAC GGCTTCTCCC ACCAGGGGCC GGGGCTCATC
GACACGGTCG TGCCGCTCTC GCCCGGGGTC GCCCGGATCT GGCTGCCGCC GGACGCGAAC
AGCCTGCTCT CGGTCGCCGA CCACTGCCTG CGCAGCCGCG ACCACGTCAA CCTGCTCGTC
GCCGACAAAC AGCCGCACCT GCAGTACCTG ACCGCCGACG AGGCCGCCGA GCACGCCGCC
CGCGGCGGGT CGGTCTGGGA CTGGGCCGGC ACCGAGACCG ACCTCGACCG TGAGCCCGAC
GTGGTCCTCG CCGGGATCGG CGACGTGCCG ACACTGGAGA TCCTCGCGGC CGCGGACCTG
CTCCGCCGGT ACGTGCCCAG CCTGGCCGTC CGGGTCGTCA ACATCATCGA CCTGATGGCC
CTGCTGCGCT CGGACCTGCA CCCGCACGGG TTCTCCACGC CGATGTTCCG CGCGCTGTTC
ACCGACTCGA CGGACGTCGT CGTCGGATTC CACGGCTACA GCCGGGCCGT CCACCAGTTG
CTGCACGGCC GGGCGAACCC GCAGCGGTTC CACGTCCGCG GGTTCACCGA GCAGGGCACG
ACCACGACGC CGTTCGACAT GGTCGTCCGC AACGGCCTGA GCCGGTACCA CCTGGCCCAG
CTCGCCGTGG AGTTCACCCG GACCACCCGT CCCGGCACCG ACCGCCTGGT CAGCCACTGC
CAGGACCAGC TGACCCGCCA CGACGCCCAC GTCACCGAGC ACTTCGAGGA CCTGCCCGAG
ATCCGGGAGT GGACCTGGCC GGGCCGCGAT ACCTGA
|
|---|
| Protein sequence | MTAPAVHDQE QGDQEQGGLE HGLDEAQLDG LIAYWNAANY LTAAQIYLMD NPLLRRPLRR
DDIKPRLLGH WGTSPALNLV YAHLNRLVRR TGQDVLYVAG PGHGGPALVA NTYLEGTYSE
IYPSVSRDVA GLTQLVRRFS TPGGIPSHVS VPTPGSIHEG GELGYALVHA FGAVFDHPDL
LVAAVVGDGE AETGPLEGSW KGVDFLNPSR DGAVLPILNL NEYKIANPTV LGRLSRERLN
HLFAGHGYDV LWVEGDDVRA VHRAFSAALT TAHSRIRDIQ RTARRPGATV TEAPIWPMIV
LRTPKGWTGP HEVDGVLVEG TFRAHQVPLS GVRDNPEHLA QLEAWLRSYQ PERLFDADGR
LVPELAALAP DGPARLGATS YANGGVRTEP LRLRDWRAHA LDVDPARRGS LVHETTRPLG
ELLADVYRDN PTTFRVFSPD ELASNRLGAI LDVTDRCLVA PIDPRDDRVS PAGRAMEVLS
EHLCEGWLEG YTLTGRHGLF ATYEAFAMVS ASMVIQHTKW LQEASRLAWR APVPSLNVLL
TSTCWRNDHN GFSHQGPGLI DTVVPLSPGV ARIWLPPDAN SLLSVADHCL RSRDHVNLLV
ADKQPHLQYL TADEAAEHAA RGGSVWDWAG TETDLDREPD VVLAGIGDVP TLEILAAADL
LRRYVPSLAV RVVNIIDLMA LLRSDLHPHG FSTPMFRALF TDSTDVVVGF HGYSRAVHQL
LHGRANPQRF HVRGFTEQGT TTTPFDMVVR NGLSRYHLAQ LAVEFTRTTR PGTDRLVSHC
QDQLTRHDAH VTEHFEDLPE IREWTWPGRD T
|
|---|
| |