Gene Franean1_6912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6912 
Symbol 
ID5675225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8420851 
End bp8421708 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content68% 
IMG OID641245761 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001511152 
Protein GI158318644 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.131437 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCAAGC GGACGAGGTT CAAGGAGTAC GAGGACCGGT ACGCCAACTA CCGGTTCGAG 
TTAGACGAGG ACGGCATCCT GCTCATGCAG TGCCACACCA ACGGCGGCAG CCTGGTGTGG
GACTGGAAGT CCCACGACGA CATGGCCGAC GCGTTCGCCG ACGTCGCGGG CGACCGCGAG
ATCAAGGTGC TGATCCACAC CGGCACCGGC GAGAACTACA ACGCCAACTG GGGCACCCTC
CCCAACGGCG AGCCCCCCGA GAAGCCGGAG TACCGGCTGA TGCCGGGCGA CCGCGGGCTA
CGCAAGCTCG ACGAGAAGGC CTGGTACAAC CGCAACCTGA TCAACAACGT CCTCGACGTC
GGCGTCCCCA TGATCAGCGC GGTCAACGGC CCCTGCAACA TCCACTCCGA GGTTCCCCTG
ATGGGGGACA TCGTGCTCGC GTCCGAGGAC GCGTACTTCC AGGACGTGTC GCACTTCCCC
CGCGGGCAGG TACCCGGCGA CGGCCAGCAC GTCATCTGGC CCTTCCTCGT CGGCCACAAC
CGCGCCCGCT ACCTGCTGCT CACCGGGAAG AAGCTCGGCG CCCAGGAGGC GCTCTCGTGG
GGCGCCGTCG CCGAGGTGCT CCCGAAGGAC CAGCTCCTCG ACCGTGCCTG GGAGCTCGCG
CGGGAGCTGG TGCGCAAGCC ACCGCTCGTG CTGCGCTACA CCCGCGACCT GTTCACCCAG
GACCTCAAGC GGGCCTTCCT GAACGAGCTC GGCCACGGCC TGGGCCGCGA GACCTACGCC
CAGCGGGAGT TCTTCCCGTT CGGCGGCGGC ATGGAGCCAC TGGACAGACC GTGGGACGCA
CAGCCCTGGT CGGATTAA
 
Protein sequence
MVKRTRFKEY EDRYANYRFE LDEDGILLMQ CHTNGGSLVW DWKSHDDMAD AFADVAGDRE 
IKVLIHTGTG ENYNANWGTL PNGEPPEKPE YRLMPGDRGL RKLDEKAWYN RNLINNVLDV
GVPMISAVNG PCNIHSEVPL MGDIVLASED AYFQDVSHFP RGQVPGDGQH VIWPFLVGHN
RARYLLLTGK KLGAQEALSW GAVAEVLPKD QLLDRAWELA RELVRKPPLV LRYTRDLFTQ
DLKRAFLNEL GHGLGRETYA QREFFPFGGG MEPLDRPWDA QPWSD