Gene Franean1_6829 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6829 
Symbol 
ID5675142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8323812 
End bp8324843 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content75% 
IMG OID641245678 
Producthypothetical protein 
Protein accessionYP_001511069 
Protein GI158318561 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATCG GATCGGTCGC CGAGGGGCCG TACTTCGACG AGCTGGCCGT CGGGCAGCGG 
TTCCGCTCCG CGCCGGGGGT CACGCTGACC GCCGGCCTCG CGGACGTCCA CCGCTCGATC
GTCGGCGGCC GGCTCGCCCT GGCCCTCGAC ACCGCGCTGT GCGCCGAGGT GACCGGCGCC
GCGGCGCTCG CCCCGCCGAA CGTCGTCTGG GACGTCGCCA TCGGGCAGTC CACGGTGGTC
ACCCATCACG TGAAGGCCAA CCTGTTCTAC CGCGGGCTGG TCTTCCGCCG GGCGCCCGAG
ATCGGGGACA CGCTGCGGAC GTCCACCGAG GTCGTCGCGC TGCGGCAGAA CAACGTCCGG
GCCGGGCGCC GGCCGACCGG GCTGGCGGTG CTGCGCATCA CCACCGTCGA CCAGCGGGAC
CGGCCCGTCC TGGACTTCTG GCGGTGCGCG ATGCTCCCGC TGCGCGACCC CGACCGGGCC
ACCGGGCACC GGGACGACAT CGAGGCCATC GGGACCGTCG AGACGGCCGG GACGGCGGAG
CTCGGGGCCG TCGTCGAGGG CTGGGACCTC GAGCGCTTCG CGGCCGCGAC CGAGGGCGCG
GGCTTCGCCG ATCTCAAGGT CGGGCAGAGC TGGCGGGTCG GCGGCGGCGA CGTCGTGTCC
AGCGCGCCCG AGCTGGCCCG GCTCACCCTG AACATCGCCC AGGTGCACCA CGACACCCGG
GCCGGCGGCG GGCGGCGGCT GGTCTACGGC GGCCACACCA TCGGCCTCGC GTTCGCGCAG
GTCACGCGGG CGCTGCCACG GCTGGTCACC GTCGCGGGCT GGCACGGGTG CGACCATGTC
GGCCCGGTGT ACGAGGGCGA CACCCTGCGC AGCGACATCA CGGTGGAGGA CCTCACACCG
CTCGCCACGG GTGGAGGCCT CGTCAGCCTG CGTTCGCGGG TACGCGCCGA CGGCGGACCC
GGCGACGGCG AGCCCGGCCA GGAACCCGAC CGGGACGTCC TCGACTGGCG CTTCGTCGCG
GTCCTGCCCT GA
 
Protein sequence
MTIGSVAEGP YFDELAVGQR FRSAPGVTLT AGLADVHRSI VGGRLALALD TALCAEVTGA 
AALAPPNVVW DVAIGQSTVV THHVKANLFY RGLVFRRAPE IGDTLRTSTE VVALRQNNVR
AGRRPTGLAV LRITTVDQRD RPVLDFWRCA MLPLRDPDRA TGHRDDIEAI GTVETAGTAE
LGAVVEGWDL ERFAAATEGA GFADLKVGQS WRVGGGDVVS SAPELARLTL NIAQVHHDTR
AGGGRRLVYG GHTIGLAFAQ VTRALPRLVT VAGWHGCDHV GPVYEGDTLR SDITVEDLTP
LATGGGLVSL RSRVRADGGP GDGEPGQEPD RDVLDWRFVA VLP