| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6719 |
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| Symbol | |
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| ID | 5675032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 8165208 |
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| End bp | 8167730 |
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| Gene Length | 2523 bp |
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| Protein Length | 840 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641245567 |
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| Product | helicase c2 |
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| Protein accession | YP_001510959 |
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| Protein GI | 158318451 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1204] Superfamily II helicase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGCTGG ACTGGAACCG GATCGGCTCG GCGTCGCCGC AGCGGCTCCT GAGACCGCGG
GACATCTTCG CGGCGCTGCC GAACAAGCCC TGGTCCTACC TGCGGCAGGA ACAGGGCGAG
GCGCTGGAAG GCTGGTTCGA CCGCCGAAGT AACCGCGACG TCGTGATCAA GCAGAACACG
GGAGGCGGGA AGACCGTCGT CGGTCTCCTC ATCGCGCAGA GCACCCTCAA CGAGGGCGTC
GGCAAGGCCG TTTACCTCGC TCCGGACACC TATCTGGCAA GCCGCGTCCG GGCCGAGGCC
GTCCGGCTGG GCCTGCCGAC CGCGGACCGG CCCGACGACG TCGGTTTCGC CAGTGGCCGC
GCCATCCTCG TCACGACCTT CCAGAAACTG GTCAACGGCC AGTCCGTGTT CGGCGTGACC
GGGGGCCGCC GCCCCGCGAT CGATCTGGGC GTGTGCGTCG TCGACGACGC GCACGCCGCA
CTCGCCACAA CCGAGGGCCA GTTCCGTCTC ACCATCCCGT TCGAGCACCC AGCGATGCGG
AAACTGTTCG ACCTGTTCCA CTCGGCCGCC GAGGGCCAAA GCCAGAAGGC CTGGCTGGAC
ATGTCCTTCG GCGACCCGGG TGCCGGGATC CGGGTGCCGT TTTGGGCCTG GGCCGACCTG
CAGAGCGAGG TACTCAAGAT CCTGCACCCG CACCAGCGCG ACCCCGAGTT CATGTTCGCC
TGGCCACTGA TCGCCGACTG CCTGAGCCTG TGCGCGGCGA TGCTTTCCAG CCGGGGCGTG
GAGATCCGAC CCCCGTGCCC GCCCATCGAC AAGATCCCCT CGTTCGTAAA CGCCAAGCGG
CGCGTGTACC TGACGGCGAC CCTCTCCGAC GACAGCGTGC TGGTCACCAA CCTCAAGGCC
GACCCGAAGG ATCTGACGAA CATCGTCACC CCCGGCAGCG CGGCCGACCT CGGTGACCGC
CTGGTACTCG CGCCGCTGGA GCTCAACCCG ACGCTCGATG AGGCGGCGAT TCGGCAACTG
GCCAAGGGCT TCGCGACCGG GGACCGCGAC GGTGACGGGC GCCCGGAGGC CAGGCCCGTG
AACGTGGTGG TGCTCGTGCC CAGCGCAGTC AAGGCCGCGC AGTGGCGTCG CCTCGCCGAC
CGCGAGCTCT ACGTCAGAGA TCTCGAGCAG GGTGTCGCCG CGCTCACTGC CGGGCATGTC
GGCCTGGTCG TGCTCGTCAA CAAGTACGAC GGCATCGATC TGCCTGGCGG CGCATGCGAA
CTGCTCATCA TCGACGGCAT CCCCCGGTCT CTCGACGCAG CCGACCGCCG CGAGGCCTCC
GCCCTGGCGG ACAGCCCAGC CCAGCGCGCA CGCGACGTCC AGCGGATCGA GCAGGGCATG
GGCCGCGGCG TCCGTGACGT CAACGACCAC TGCGCGGTGC TCCTCATGGG CGCCGGCCTG
GGCCTCGCCG TGCACGACGA CGCCTGGCTG GAGCTGTTCT CCCCGGCGAC CCGCGCGCAG
CTGCGCCTGA GCCGGGACGT TGCCATACAG GTGCAGCACA CGGGCCTGGA AGGCATTCGC
AGCGCGTTGT CGGTCTGTCT GGACCGCGAC CCGCAGTGGG TGGAACGCAG CAAGCTCGCC
CTCGCCCCCA TCCGCTACAA CAACGTCGGG TCCGTGCGTC CCGAAGCCGT GGCCGCCCGC
GAGGCGTTCG ACCTGGCGAC AACCGGCCAG TTCAACCAGG CGGCCCAGCG GTTGCAGACG
GCGATCGACG GCATCACCGA CCCCGCGCTG CGTGGCTGGG TGCGGGAGCA GAAGGCGACC
TACCTGCACT TCGTCGACCC TGCCGTCGCG CAGCAGCAAC TGGGAGCAGC GATCCGCGAG
AACCCGGCCG TGCTGCGACC GGCCGTGGGC GTGGACGTCC GGCAGGCCCG TGCCGCCGCG
GTCCAGGCCC GCGCCGCCGC CGAGCACCTC ACCGCCACCT ATGCCGACAG CACAGCCCTC
GTCCTCGGCC TGCGCGCGGT ACTCGATGAT CTCGTCTGGG ACGACGACCG CACCGACAAC
ACCGAGGCGG CCTGGGAGAA GCTGGGCCTG CACCTGGGGT TCGACAGCAT GCGCCCCGAA
CGCCTGTACG GCACCGGCCC GGACAACCTG TGGGCGCTTA GTGCCACCCG GCACGCTGTG
ATCGAACTCA AGACCGGAGT GAAGGCAGAC TGCCCCGGCA TCGCCAAGAA GGACGCCGAC
CAGCTCGGCG GCAGCGTGCG CTGGAACGAG AGCAAGAACC CCGGGCCGGC CAACGTGCCG
GTCATGCTGC ACCCGGTCGA CGTGCTCGAC CCCAAGGCCG TCGCCGTGCC CGGCATGAGG
GTGATCACTC CGGCCAAGCT CGACGAGCTG AAGACGGCCG TCCAGGCCTT CGCGACGGCG
CTCGCCCAAG ACGCCAGCCG TTGGGCCAGC GAACAAGCGG TTGCCAACCA ACTGGCGTTC
CATGCCCTGA CCGGCGACCG CATCATCGCT ACGTACTCCG TCGCGGTCGG GCGACCCAGC
TGA
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| Protein sequence | MALDWNRIGS ASPQRLLRPR DIFAALPNKP WSYLRQEQGE ALEGWFDRRS NRDVVIKQNT
GGGKTVVGLL IAQSTLNEGV GKAVYLAPDT YLASRVRAEA VRLGLPTADR PDDVGFASGR
AILVTTFQKL VNGQSVFGVT GGRRPAIDLG VCVVDDAHAA LATTEGQFRL TIPFEHPAMR
KLFDLFHSAA EGQSQKAWLD MSFGDPGAGI RVPFWAWADL QSEVLKILHP HQRDPEFMFA
WPLIADCLSL CAAMLSSRGV EIRPPCPPID KIPSFVNAKR RVYLTATLSD DSVLVTNLKA
DPKDLTNIVT PGSAADLGDR LVLAPLELNP TLDEAAIRQL AKGFATGDRD GDGRPEARPV
NVVVLVPSAV KAAQWRRLAD RELYVRDLEQ GVAALTAGHV GLVVLVNKYD GIDLPGGACE
LLIIDGIPRS LDAADRREAS ALADSPAQRA RDVQRIEQGM GRGVRDVNDH CAVLLMGAGL
GLAVHDDAWL ELFSPATRAQ LRLSRDVAIQ VQHTGLEGIR SALSVCLDRD PQWVERSKLA
LAPIRYNNVG SVRPEAVAAR EAFDLATTGQ FNQAAQRLQT AIDGITDPAL RGWVREQKAT
YLHFVDPAVA QQQLGAAIRE NPAVLRPAVG VDVRQARAAA VQARAAAEHL TATYADSTAL
VLGLRAVLDD LVWDDDRTDN TEAAWEKLGL HLGFDSMRPE RLYGTGPDNL WALSATRHAV
IELKTGVKAD CPGIAKKDAD QLGGSVRWNE SKNPGPANVP VMLHPVDVLD PKAVAVPGMR
VITPAKLDEL KTAVQAFATA LAQDASRWAS EQAVANQLAF HALTGDRIIA TYSVAVGRPS
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