Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_6714 |
Symbol | |
ID | 5675027 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 8155323 |
End bp | 8156000 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641245562 |
Product | transposase |
Protein accession | YP_001510954 |
Protein GI | 158318446 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG5659] FOG: Transposase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCGCGG GCCACAGCAT AGACAGTGAT CACTTGCGGA GTGAGTTCGA GGGTTTGCTG GGCCTGGTCG ATCCACGTTT CGCGCGGGCG GCGACACGGC GGCGGGTGCG GTCGTTCCTG CTCGGGCTGA TGGCAGGGCT GGGTCGGGCG AACTGCTGGA CGCTCGCGGA GCACGCTGGG GAGGACAGCC CGCACGGGAT GCAGCGGCTC CTGGCCCGCG CGGTCTGGGA CGCCGACGCC GTGCGCGACG ACCTGCGGGG CTATGTCGTC GACAGGCTCG GCACCGCCGG GGCGGTGCTG GTCGTCGACG AGACGGGTGA CCTGAAGAAG GGAACGGCGA CGGTCGGTGT CCAACGCCAG TACACCGGCA CCGCGGGCAG GATCGAAAAC GCGCAGGTCG CGGTCTATCT GACCTATGCC ACCGATCGCG GCCAAGCGTT CATCGACCGC GCTCTCTACC TGCCCCGCAG TTGGCCTGGC GACCCGGCGC GGTGCGCGGC GGCCGGCGTG CCCGAGGGAA CCGGGTTCGC GACGAAGCCG GCGCTGGTGC GGCGCACGCT CACCCGGTCG CTGGACGCCG GCGTGGCGAC CGGCTGGGTC GCGGCCGACG TGTGGGGTGC CAGAACTCGG CCACCGGCCT TGACCTGGTC ATTTAGGCGG CTCGTTCGTA TTCGTTGA
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Protein sequence | MAAGHSIDSD HLRSEFEGLL GLVDPRFARA ATRRRVRSFL LGLMAGLGRA NCWTLAEHAG EDSPHGMQRL LARAVWDADA VRDDLRGYVV DRLGTAGAVL VVDETGDLKK GTATVGVQRQ YTGTAGRIEN AQVAVYLTYA TDRGQAFIDR ALYLPRSWPG DPARCAAAGV PEGTGFATKP ALVRRTLTRS LDAGVATGWV AADVWGARTR PPALTWSFRR LVRIR
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