Gene Franean1_6714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6714 
Symbol 
ID5675027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8155323 
End bp8156000 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content71% 
IMG OID641245562 
Producttransposase 
Protein accessionYP_001510954 
Protein GI158318446 
COG category[L] Replication, recombination and repair 
COG ID[COG5659] FOG: Transposase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGCGG GCCACAGCAT AGACAGTGAT CACTTGCGGA GTGAGTTCGA GGGTTTGCTG 
GGCCTGGTCG ATCCACGTTT CGCGCGGGCG GCGACACGGC GGCGGGTGCG GTCGTTCCTG
CTCGGGCTGA TGGCAGGGCT GGGTCGGGCG AACTGCTGGA CGCTCGCGGA GCACGCTGGG
GAGGACAGCC CGCACGGGAT GCAGCGGCTC CTGGCCCGCG CGGTCTGGGA CGCCGACGCC
GTGCGCGACG ACCTGCGGGG CTATGTCGTC GACAGGCTCG GCACCGCCGG GGCGGTGCTG
GTCGTCGACG AGACGGGTGA CCTGAAGAAG GGAACGGCGA CGGTCGGTGT CCAACGCCAG
TACACCGGCA CCGCGGGCAG GATCGAAAAC GCGCAGGTCG CGGTCTATCT GACCTATGCC
ACCGATCGCG GCCAAGCGTT CATCGACCGC GCTCTCTACC TGCCCCGCAG TTGGCCTGGC
GACCCGGCGC GGTGCGCGGC GGCCGGCGTG CCCGAGGGAA CCGGGTTCGC GACGAAGCCG
GCGCTGGTGC GGCGCACGCT CACCCGGTCG CTGGACGCCG GCGTGGCGAC CGGCTGGGTC
GCGGCCGACG TGTGGGGTGC CAGAACTCGG CCACCGGCCT TGACCTGGTC ATTTAGGCGG
CTCGTTCGTA TTCGTTGA
 
Protein sequence
MAAGHSIDSD HLRSEFEGLL GLVDPRFARA ATRRRVRSFL LGLMAGLGRA NCWTLAEHAG 
EDSPHGMQRL LARAVWDADA VRDDLRGYVV DRLGTAGAVL VVDETGDLKK GTATVGVQRQ
YTGTAGRIEN AQVAVYLTYA TDRGQAFIDR ALYLPRSWPG DPARCAAAGV PEGTGFATKP
ALVRRTLTRS LDAGVATGWV AADVWGARTR PPALTWSFRR LVRIR