Gene Franean1_6605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6605 
Symbol 
ID5674920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8039111 
End bp8039995 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content68% 
IMG OID641245456 
Product6-phosphogluconate dehydrogenase NAD-binding 
Protein accessionYP_001510848 
Protein GI158318340 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATG GCACCGATAC CCCCGTGACA GTGATCGGAC TCGGACTGAT GGGCCAGGCA 
CTCGCCGGCG CCTTCCTGAA GGCCGGGCAT CCCACGATTG TCTGGAACCG CACGACCTCG
AAGGCCGACC ATCTGGTGGC CGATGGCGCG CGGCTGGCGC CGACGATCGG CGAAGCGCTG
GCGGCGGGCG TCCTGGCGAT CATCTGCGTC ACCGACTATC ACGCCGTGCG TGAACTGCTC
GACGCGAGCG ACGTTGAGTT GGACGGCGCG ATGTTGGTCA ACCTCACCTC GGGCGACTCG
ACCCAGGCCC GGGAGGCTGC CCTGTGGGCC GAGCGGCGTG GCGCGCGTTA CCTGGACGGC
GCCATCATGG CCATCCCGCC GGCGATCGGG ACCGCCGAGG CGGTGATCCT GCACAGCGGA
TCGCGGTCGG ACTTCGAGGC GCACGCATCC ACACTCGGGG CGCTCGGCAC GGTCAGCTAC
CTCGGTGCGG ACCACGGGCT GGCGTCCCTG TACGACGTCG CTGGCCTCGC CATGATGTGG
AGCGTCCTGA ACGCCTGGCT CCAGGGCACA GCCCTGGTCA GGACCGCCGG TGTCGACGCC
GCTACGTATG CGCCGTTTGC GCGGCAGATC GCTGCCGGTG TGGCCGAATG GTTGCCTGGC
TACGCCGAGC AGATCGACAG AGGTGCCTTC CCCGCCGAGG TGTCGGCCTT GGAGACCGAC
GCGCGGGCGA TGGAGCATCT GATCAAGGAG AGCGAGGCGG TGGGTGTCAA CGCCGAACTA
CCCGGGCTGA TCAAAGCGAT CGCCGACCGC TCGATCGCCG CTGGGCATGG TAAAGAGCAG
TATCCCGTGC TGATCGAGGA GTTCAGCAAG TCCCGGGGCG GCTGA
 
Protein sequence
MSDGTDTPVT VIGLGLMGQA LAGAFLKAGH PTIVWNRTTS KADHLVADGA RLAPTIGEAL 
AAGVLAIICV TDYHAVRELL DASDVELDGA MLVNLTSGDS TQAREAALWA ERRGARYLDG
AIMAIPPAIG TAEAVILHSG SRSDFEAHAS TLGALGTVSY LGADHGLASL YDVAGLAMMW
SVLNAWLQGT ALVRTAGVDA ATYAPFARQI AAGVAEWLPG YAEQIDRGAF PAEVSALETD
ARAMEHLIKE SEAVGVNAEL PGLIKAIADR SIAAGHGKEQ YPVLIEEFSK SRGG