| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6586 |
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| Symbol | |
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| ID | 5674901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 8015252 |
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| End bp | 8016160 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 641245437 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001510829 |
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| Protein GI | 158318321 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.685606 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTCACCT CGGCGGTCGT CATCACGGGA GCGGCATCCG GGATCGGGCG GGCGTGCGCG
GAGCTGTTCG CCGCGCGGGG GTTCGGCGTG GTCGCCGTGG ACGTCGACGA GGTCGGCCTG
GCGGCGCTGA CCCGAGCACA GTCGCGCGCC CCGCGGCCCG CCGTGGCCCC GGCGGATCCC
CGGACCGCGG AGGATCCCCG GACCGCGGCG GATGCCGGTG CCGTGACGGG TGCGGACTCC
CGGCCGGCGG GCGGGCCGGA GCCGCGGATC GTCCCGATGG TCGGGGACGT CTCGGTCGAG
GAGACCGGGG CCGCCATGGC GGAGCTGGCG CTCGCGAGCT TCGGGCGGCT GGACGTCGCG
GTGCTCAACG CCGGGATCGG CACGACGCTG CCGTGGGAGG CCCCGGGCGC GATCGACCGG
CTGGACCGGA TCCTCGCCGT CAACGTGCGG GGCGTCGCGA TCGGGATCCG TTCGGTGGTC
CCCGCGCTCC GGGCGGGCGG TGGCGGCTCA ATCGTCGTGA CCGCCTCCAG CGGCGGGTTG
CAGAGCGAAC CGGGGAACTG GGCGTACAAC GCGTCCAAGG CGGCTGTGAT CAACATGGTG
CGGGCCGCGG CGCTCGACCA CGCCGCCCAG AACATCCGGA TCAACGCCGT CGCCCCCGGC
CTGACCGAGA CGGCGCTGAC CGCGCGCCAC CGCACCGACC CGGGGTCCAC CGCGGCGGTG
AGCCGCCGCA TTCCGATGGG GCGCTGGGGG CAGCCGGGCG AGCTGGCCTC GGCCGTCTGG
TTCCTGGCCT CCGCCGAGTC GTCCTACATC ACCGGAACGA CGCTGGTCGC CGACGGGGGC
CTGACCGCGC ACCACGGGGT CGTGCCTCTA CCGGCTCCGG AGGTCGCGCT GCCGTCTCCG
GAAATCTGA
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| Protein sequence | MVTSAVVITG AASGIGRACA ELFAARGFGV VAVDVDEVGL AALTRAQSRA PRPAVAPADP
RTAEDPRTAA DAGAVTGADS RPAGGPEPRI VPMVGDVSVE ETGAAMAELA LASFGRLDVA
VLNAGIGTTL PWEAPGAIDR LDRILAVNVR GVAIGIRSVV PALRAGGGGS IVVTASSGGL
QSEPGNWAYN ASKAAVINMV RAAALDHAAQ NIRINAVAPG LTETALTARH RTDPGSTAAV
SRRIPMGRWG QPGELASAVW FLASAESSYI TGTTLVADGG LTAHHGVVPL PAPEVALPSP
EI
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