Gene Franean1_6520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6520 
Symbol 
ID5674835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7928055 
End bp7928777 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content75% 
IMG OID641245368 
Producthypothetical protein 
Protein accessionYP_001510763 
Protein GI158318255 
COG category 
COG ID 
TIGRFAM ID[TIGR03083] uncharacterized Actinobacterial protein TIGR03083
[TIGR03085] conserved hypothetical protein TIGR03085 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.223836 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0543517 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGCTG GGCGGGCAAG GGCACGACGG GAGAACCTGG CCGATCTCCT CCGCGAACTC 
GGGCCGGCGA GCCCCACGCT GTGCGAGGGC TGGACGGCGC ACGACCTCGC CGCGCACCTG
GTCACCCGGG AGCGCGTGCC GTGGGCGGCA CCCGGCCTGG TCGTCGGCGC GCTGCACGGT
GTCACCGAAC GCGCCGAGCG CGCGACGATG CGCTCGCACA CCTTCCCCGA GCTGGTGGAG
ATGTTCCGGG CGGGCCCGCC GTGGTGGCAT CCGACCCGGT TCGCCGTCGT CGACGACGCC
GCCAACGCGA TCGAGTTCTA CGTCCACACC GAGGACCTGC TCCGGGCCGC GCCCGGGTTC
GCCGCGGTAG GTGATTCAGG TGGTTTCGCC GGTGCTGTGG GCGGTTCCGG TGGTGCGGTC
GGTGGCGCCG GGCTCGGGCT GAAGCCGGGT GACGACGTGA TCGCCGACCG GGAGGCGCTC
TGGGGCGCGC TCCGGCTGGT CGGTCTCGCC GGGTTCCGGC ACAGCGAGGT CGGGGTGGTG
GCCGAACGCA CCGACACCCC CGGGCGGCTG ACCCTGCGGC GCCGCGAACC GGTGGTCGAG
ATCGTCGGAC CCCCCGAGGA GCTCCTACTG TTCGCTTTCG GGCGGCGCGC CGCGGCCCGG
GTCGAGCTGC GCGGCGACCC GGAGGCGATC ACGGCGCTGG CCGGGGCGCC CGCCGGCCTC
TGA
 
Protein sequence
MAAGRARARR ENLADLLREL GPASPTLCEG WTAHDLAAHL VTRERVPWAA PGLVVGALHG 
VTERAERATM RSHTFPELVE MFRAGPPWWH PTRFAVVDDA ANAIEFYVHT EDLLRAAPGF
AAVGDSGGFA GAVGGSGGAV GGAGLGLKPG DDVIADREAL WGALRLVGLA GFRHSEVGVV
AERTDTPGRL TLRRREPVVE IVGPPEELLL FAFGRRAAAR VELRGDPEAI TALAGAPAGL