Gene Franean1_6493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6493 
Symbol 
ID5674808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7894957 
End bp7895352 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content74% 
IMG OID641245341 
Productresponse regulator receiver protein 
Protein accessionYP_001510736 
Protein GI158318228 
COG category[T] Signal transduction mechanisms 
COG ID[COG4753] Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0923194 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.49413 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTCCC CTCCGGCGGT CTCCGTGCTG GTCGTTGACG ACCAGCGGCC CTTCCGGCTC 
GCCGTGCGCG CGGTCCTGCG CCGTGCCGCC GGTTTCGTCC TCGCCGGTGA GGCCGAGACG
GGCGAGGACG CGCTTACCGC CGCCGCCGAG CTGCGCCCTG ACCTGGTGCT CATGGACGTC
AACCTGCCCG GTATCGACGG CGTGGTCGCC GGCGCGCGCA TCCGCGAGGA CGCGCCCGAC
ACGGTCGTCG TCCTGTGCTC GACGTACGGG CGGACGGACC TGCCGGCGGC CGTCGCGGCC
AGCGGGCTGG ACTACCTGTG CAAGGAGGAC CTGGCACCGA GCGTCCTACG CGAGATCTGG
AGCCGGCGCA CGCCGCCGTC CGATCCGCCC CGATAG
 
Protein sequence
MSSPPAVSVL VVDDQRPFRL AVRAVLRRAA GFVLAGEAET GEDALTAAAE LRPDLVLMDV 
NLPGIDGVVA GARIREDAPD TVVVLCSTYG RTDLPAAVAA SGLDYLCKED LAPSVLREIW
SRRTPPSDPP R