Gene Franean1_6481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6481 
Symbol 
ID5674796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7878864 
End bp7879763 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content73% 
IMG OID641245329 
Producthypothetical protein 
Protein accessionYP_001510724 
Protein GI158318216 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.459745 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.157533 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATGG ATGATGCGCC CCGCGGTCTG CGGGAAAGTC TCAAACGTGT CGCCGTGACG 
CTGAAAGAGG CGGAGATCCC CTTCGCGCTC GGCGGCAGCT ACGCGTGCTG GGCCCGCGGC
GGGCCGGAGC CCGTGCACGA CGTGGACTTC ATGCTCCGCG AGGCGGACGT CCCGCGTGCC
GTGGAGGTTC TCTGCGCCGG TGGGCTGCGC CCGGTGGACC CGCCCGAGGA CTGGCTGACC
AAGGTCTTCG ACGGCGACGT CCTGGTCGAC CTGATCCATC ACCCGGTCGG GCGGGCGGTC
ACCGACGAGA TGCTGGCCCG CTCGAGCGAG ATGTCCGTCG ACTCGGTCCG GATGCCCGTC
CTCGACGCCA CCGACTGGTT CGAGATGACC CTGCTCGCCC TCGACGAGCG GTACTGCGAC
CTCGGCCGCG TGATCCCCAT GATCCGCGCG ATGCGCGAGC AGGTCGACTG GGAGCAGGTC
CGCCGGGCCA CCGCCGAGTC GCCGTTCGCC GAGGCCGTGC TGCTGGTCGC CACCCGGCTG
AAGCTGATCC CGCCGCACGT CGTCACCCCG CCGCGCGCCG CACGCGCCGT GGATGCCGTG
GACGGGGTGG GTGCCGCGGG CGCCGCCGAG CCGGTCGCCG TCCTGGACGT CACCGAGCCG
GCGGAGTACC TGGCCGGTGA CCTGCACGAG CGCCTGGCGG AGGATCCGCG GGTCGCCGAG
CTCGGCCTGG ACGTCGCCGT CGGCCCGGAG GGGATCACCG TGCGCGGGGA GGTGGCCACC
GAGGCCCGCC GCCGCGCGGT CGACGCGGTG CTGGCCGACG CCGTGCCCGG CCGGCCCGTC
CGCAACGACG TCATCGTGTC GAAGCGCGAC TCACCGTCGA CGATGGAGAG TGTGTCGTGA
 
Protein sequence
MAMDDAPRGL RESLKRVAVT LKEAEIPFAL GGSYACWARG GPEPVHDVDF MLREADVPRA 
VEVLCAGGLR PVDPPEDWLT KVFDGDVLVD LIHHPVGRAV TDEMLARSSE MSVDSVRMPV
LDATDWFEMT LLALDERYCD LGRVIPMIRA MREQVDWEQV RRATAESPFA EAVLLVATRL
KLIPPHVVTP PRAARAVDAV DGVGAAGAAE PVAVLDVTEP AEYLAGDLHE RLAEDPRVAE
LGLDVAVGPE GITVRGEVAT EARRRAVDAV LADAVPGRPV RNDVIVSKRD SPSTMESVS