| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6421 |
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| Symbol | |
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| ID | 5674736 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 7797518 |
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| End bp | 7799932 |
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| Gene Length | 2415 bp |
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| Protein Length | 804 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641245269 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_001510664 |
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| Protein GI | 158318156 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.82438 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.699479 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGAAGC GGTACTCCAC GGCGGGACTG AGGTATCCGG TGACGATCGA GACCGAGACG
GCGGACCTGG TGGACCGGTG GTTCGCCGAG ATCACTGCGG TCGATCTCCT TCCGCTCGCC
GCCGCGGACG CCCGCGCCTG GCTGGCACGC CTGGCGGCGG CGCTGGTCCG GGCGGTGAGT
GCCGAGCCGT TCCGGCCCGA GATCGGCTAT GACGTGGGCG TGCGGCTGGT CCACGGCCAC
GTGACGTCCG GTGAGGCCCT CGGACGGACC GTCCGGCTGT TCGGCCGGCA CCTGGCCCAC
CACACCGGCG GCTGGGCCCG CCCGGCCGAC GGCCCCGAGA CCAGCCCGGC GGGCACAGCT
CACCCGGGCG CCGCGACGGC GACCGCCGCG ATGGGGCTCG CCGGCGGCGC GTCCGCGGCG
ACGGGGCCTG CCGCCACGGC CACCGCCGCG AAGGGGCTCG CCGGGCGGGT GCCCACGGGT
ACGGCGACCG CCGCGATGGG GAACAGCGGC GCGGCCGCTC CCGGGGCCGG GCCGTCGGGT
GAGGGCGCTC TGCTGCGCAG GCCGCCGCGG GCCGACACGC TGCCGGGCCG GGTGCCCGCC
GCGTCGACGG AGCGGGTCGT GGACCTGCTG GGCGAGCTCG TCCGCGGCCA CACCGAGACC
CTCCGGGAGC GCACGCGGGA CGGCCAGGCC GCAGCGCGTC GCGTCGACCT CGGCGCCCGG
GCCCGCGCCG AGCGCGAGCG GCGGATCTCC CAGACCAGGC TGCACGCCGT GCTCAGCGGC
ACCGCCCTCG GCATGCTCGT CGCCGACCGG ACGGGGCGCA TCGTGGAGGC CAGCGACGCC
GCGCTGGAGA TCCTCGGCCT CAGCGGGCAC ACCGCCCCGC TGGCCTGGCC GCTGCCCGAG
ATCGTCCATC CGGCAGACCG GGAGGCGGTG CGCTGGCTGT GGCGCGAGGC CCGGCGCGGG
CGGTCCCGCG GAGAATGCCG CATCCTGCGG CCCGACGGGA CGCCGACCTG GGTGGCGCTG
ACGCTCTCGA CCACCTGGCC CGGAGTGGCC GGTGACTGGT TCGGCGTCGC GATGCTCGAG
GACATCACCG AACGCCGCCG CCTGCAGGAG GAGCTCCGCT TCCACGCCCG GCACGACCCG
TTGACCGGGC TCGCGAACCG GGCCGAGTTC CTCGACCGGT TGCAGGCGGT GTTCCGGGAG
GCGCCGCCGT CCGCGCGGGT CGGCCTGTGC TACCTGGACC TCGACCGGTT CAAAATGATC
AACGAGGGTT TCGGCTACGA GGTGGGCGAC CAGCTCCTCG CCGAGGTCGC CCGCCGGCTG
GGCGGGATGG CCGTGGCGGA GCGCACCGTG GCCCGGATGG GCGGCGACGA GTTCATGATT
CTCGTCCCGG ACTGCGGTGG GCTCGACGAG ATGACCGGCA TCGCCCGGCG GGTCCTGGAC
ACGCTGCGCG AGCCCGCCCG CGTCGACGGC CGCGACCTGC CCGCGACGTG CAGCATCGGT
GTGGTCGAGA TGGCGGTCGC CGACACCAGC CCGTCCGACC TCGTCGCGGC GGCCGACGCC
GCGCTGACCT GGGCGAAGAA CGGCGGCAAG AACCGGTGGA CGGCCTTCGA CCCCGACCGC
GGCACCCGGG AGGCCGCGCG TGGCCTGATG TCCCGATCGA TGCGCCCGGG CCTGGACAGA
GGCGAGTTCT CGCTGGCCTA CCAGCCGATC ATCGACCTCC GGCACGGCAC GGTCGCCGGG
GCCGAGGCAT TGCTCCGCTG GGACCACCCC CGCCTCGGGC CAACCCGTCC GGGTGAGTTC
ATCGCCCTCG CGGAGGACTC CGGCTTCATC GTCCAGCTCG GGCTGTGGGT GCTCGAACGG
GCCTGCGAGA CCGCGCGTGA CTGGCCGGCG CACATGTTCA TCAGCGTGAA CCTCTCCGCC
CGCCAGCTCC GCGAGCCGGG CCTGGTCGGC GCGGTCAAGA AGGTGCTGGA CCGGACGGGC
CTGCCGCCGC GGCGGCTCCA GCTCGAGCTG ACCGAGACGG TGCTCATGGA CTCCGGTGGC
GACCAGGTCA CCGCGCTGCA CGCGCTCAAC GACCTGGGCG TCCGCATCGT CATCGACGAC
TTCGGCACCG GGTGGTCGAA CTTCGTCTAC CTGTCGACCA TGCCGGTGCG CGGGCTGAAG
CTCGCCGGGC TCTTCGTCGA GAAGCTCGGC CGGGGCACCG AGCCCGGCCG GGACGACCAC
CTCGTGGAGG CGATCGTGGA GTTCGCTCGC AGGCTGCGGC TGTCGGTCAC CGCCGAGGGG
GTCGAGGAGC CGGAGCAGGC GGCGGCGCTG CGCTCGTTCG GCGCGGACCT GGGCCAGGGC
CACCTGTTCG GAGAGCCGGT CCCCGCCGAC GAGTTCGCCG CGACCATGCT CCGCCGCGCC
TTCGCCGCCA GCTGA
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| Protein sequence | MRKRYSTAGL RYPVTIETET ADLVDRWFAE ITAVDLLPLA AADARAWLAR LAAALVRAVS
AEPFRPEIGY DVGVRLVHGH VTSGEALGRT VRLFGRHLAH HTGGWARPAD GPETSPAGTA
HPGAATATAA MGLAGGASAA TGPAATATAA KGLAGRVPTG TATAAMGNSG AAAPGAGPSG
EGALLRRPPR ADTLPGRVPA ASTERVVDLL GELVRGHTET LRERTRDGQA AARRVDLGAR
ARAERERRIS QTRLHAVLSG TALGMLVADR TGRIVEASDA ALEILGLSGH TAPLAWPLPE
IVHPADREAV RWLWREARRG RSRGECRILR PDGTPTWVAL TLSTTWPGVA GDWFGVAMLE
DITERRRLQE ELRFHARHDP LTGLANRAEF LDRLQAVFRE APPSARVGLC YLDLDRFKMI
NEGFGYEVGD QLLAEVARRL GGMAVAERTV ARMGGDEFMI LVPDCGGLDE MTGIARRVLD
TLREPARVDG RDLPATCSIG VVEMAVADTS PSDLVAAADA ALTWAKNGGK NRWTAFDPDR
GTREAARGLM SRSMRPGLDR GEFSLAYQPI IDLRHGTVAG AEALLRWDHP RLGPTRPGEF
IALAEDSGFI VQLGLWVLER ACETARDWPA HMFISVNLSA RQLREPGLVG AVKKVLDRTG
LPPRRLQLEL TETVLMDSGG DQVTALHALN DLGVRIVIDD FGTGWSNFVY LSTMPVRGLK
LAGLFVEKLG RGTEPGRDDH LVEAIVEFAR RLRLSVTAEG VEEPEQAAAL RSFGADLGQG
HLFGEPVPAD EFAATMLRRA FAAS
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