| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6397 |
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| Symbol | |
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| ID | 5674713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 7765459 |
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| End bp | 7766205 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641245246 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001510641 |
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| Protein GI | 158318133 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.291237 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.130468 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCCTCG CGGCGGCGGA GTGTTTCGCC GCGGACGGGG CCAGGGTGGC CGTACTCGCG
CGGAACCGGG CAAATCTGGA GAAGACCATT GGCCGTCTGC TGGAGCTGGG GGCCGCCGAC
GCCGTGGCCC TGCCCGCGGA CATCACCCGC CCCGACGAGG TGACCGCCGC GTTCGACCTC
GTCCGCGACC GGTGGGGGGA ACTGAACTCC CTTGTGAACG CTACCGGCCC CAAAGGCGGC
CGGATGGGCC CCTTCGAGGA GCTCACCGAC GACGACTGGT TGGCCGCGGT CGACGTCGGC
GTGTTGGGTA TGGTCCGGTG TGTGCGGGCC GCGCTGCCCC TGCTGCGCGC CGCCGAGTGG
GGCCGCATCG TCAACATCTC CGCGCATTCG ACCAAGCGGC AGACCGCCTC GCTGATCGCG
TACACCGCCG CGAAATCGAT GGTCACCAGC ATCACCAAGA ACCTCTCGCT GACCCTGGCT
CCAGACGAGA TTCTCGTCAA CACCGTGTCT CCGGGAAGCT TTGCCTCCGA GGGTCTGGCC
ATGTGGGCCC GCGGCATCGG CATCGACCCG GAGGACCTGC ACGCCGTGAT GCGCGGCATC
ACGGAGCATT TCGGCCATCC CGCCCACCTT CCCCGCGCGG GTGCGCCGCG TGAGATCGGT
GCCGTGATCG CCTTCGTCGG CTCGCGCCGG AACACATACA TGACCGGCGC GAACGTCAAC
GTCGACGGCG GCTCCGACTT CTCCTGA
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| Protein sequence | MGLAAAECFA ADGARVAVLA RNRANLEKTI GRLLELGAAD AVALPADITR PDEVTAAFDL
VRDRWGELNS LVNATGPKGG RMGPFEELTD DDWLAAVDVG VLGMVRCVRA ALPLLRAAEW
GRIVNISAHS TKRQTASLIA YTAAKSMVTS ITKNLSLTLA PDEILVNTVS PGSFASEGLA
MWARGIGIDP EDLHAVMRGI TEHFGHPAHL PRAGAPREIG AVIAFVGSRR NTYMTGANVN
VDGGSDFS
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