Gene Franean1_6383 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6383 
Symbol 
ID5674699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7750573 
End bp7751712 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content73% 
IMG OID641245232 
Productcytochrome P450-like protein 
Protein accessionYP_001510627 
Protein GI158318119 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2124] Cytochrome P450 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.158835 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.229787 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGTTC GGCCAGCTGT GTCAGCTCGA CCAGCCTTGT CAGTTCGGCC AGCCATGTCG 
GTTAGGGAAA GCCTGCGCGA CAACGCGCTC GGCATGGTCC TCGACATGTC GGCGTTGCCC
GCGCCACTGC GGCTGATGGC CCGGCTCTCC CCCGACCCGG CGGTGAACGG GCCGCTGGAT
CCGCCGTCCC TGCTGGCTAT CGACCCGCCG GACCACACCC GTCTGCGCCG GCTCGTGTCG
AAGGTGTTCA CGCCCCGCGC GGTCGACGGG CTGCGCGGGG AGGTGGAACG GGCCGCCGAT
GCGCTGCTCG ACGCCATGGC CGACGAGGGC ACCGTCGATC TCGTCGGCCG CTGCGCGAGC
CGGCTGCCGG TGACCGTGAT CGCCACGATT CTCGGCGTGC CCGCGGCGAT GCACGCGCAG
TTCCTCGCCT GGGGCACCGC GGCCGCGGCC ACGCTCGACT TCGGCCTTCC CTACGGCGCA
TTCCGGCGGG TGGAACGGGC GCAGCAGGCC ATCAACACCT GGCTGCGCGG CCATTTCGAG
GGGCTGCGCC GCGATCCCGG CGAGGACATT CTCAGCCAGC TCGTCAGGCT CGTCGACGAC
GGTGACCGGC TGACCGAGAC GGAGCTCATC GCGACCGCCC AGCTCCTGCT CGCCGCCGGC
TTCGAGACGA CCGTCAACCT GCTGGGCAAC GGCGCGGCGT TGTTGATGGA ACATCCCGAC
CAGCTGGAGT ATCTGCGGTC CGGGCCCGAC CGGTGGCGGG TGCTGCTCGA CCCGGCCGGC
CATCCGTTCT GCCGGCTGAA TTCGGTGGCT CCGGTGGCTC CAGCGGCAGA GTCGCCCAGC
GCCGGCGCGA CCCACCACCA GCACAGCCCC AGCGCCGGCG CGGCCCCACC ACTGGCGCGA
CCGCCGGCAC GACGATCCGT ACGACGACCG GCGCGCGGGC CGGCCCGGTG CCACAGTCGG
CCCGGCCCGG CAGTCGGCCC GGCACCGCGA GGGCGCCGGG CGCGGCCACG GGCGCCGGCG
CCGGAGGAGA CACATGCCAC GCCGGCTCCC CCGGGCCGCG CCCGGAGCGG TAGAAGGACT
TCATGGGCGC GACGCACGAC CCCGCGAGGA CACAGCTGGC GAACTACCCG TTCGTCATGA
 
Protein sequence
MSVRPAVSAR PALSVRPAMS VRESLRDNAL GMVLDMSALP APLRLMARLS PDPAVNGPLD 
PPSLLAIDPP DHTRLRRLVS KVFTPRAVDG LRGEVERAAD ALLDAMADEG TVDLVGRCAS
RLPVTVIATI LGVPAAMHAQ FLAWGTAAAA TLDFGLPYGA FRRVERAQQA INTWLRGHFE
GLRRDPGEDI LSQLVRLVDD GDRLTETELI ATAQLLLAAG FETTVNLLGN GAALLMEHPD
QLEYLRSGPD RWRVLLDPAG HPFCRLNSVA PVAPAAESPS AGATHHQHSP SAGAAPPLAR
PPARRSVRRP ARGPARCHSR PGPAVGPAPR GRRARPRAPA PEETHATPAP PGRARSGRRT
SWARRTTPRG HSWRTTRSS